KEGG   Thiocapsa bogorovii: LT988_17445
Entry
LT988_17445       CDS       T07840                                 
Symbol
traD
Name
(GenBank) conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbog02044]
    LT988_17445 (traD)
Secretion system [BR:tbog02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   LT988_17445 (traD)
SSDB
Motif
Pfam: TrwB_AAD_bind TraG-D_C AAA_10 DUF87 AAA_22 FtsK_SpoIIIE HerA_C nSTAND3 AAA_16 SRPRB AAA_29 ABC_tran Zeta_toxin DEAD AAA_RNF213_3
Other DBs
NCBI-ProteinID: UHD15055
LinkDB
Position
complement(3916693..3918513)
AA seq 606 aa
MSPYANPWRPLFELPAMLLWTGIAAASWATAELWDLHAASFRWLGVGSLVMALTWLPGTV
RGINRRDWLRGRPQQFIDPQVFAARVPSWPGLLWMGRGFDWEARHAQEALDLIRLGAERF
APRDPARLGATWIHGLGGADAEVTVPLAHTEGHLLIVGTTGCGKTRLFDLLVTQAVLRGD
AVVILDPKGDRGLRAAAERACMLAGTPERFVSFHPAFPAASVRLDPLRHFQRATELASRV
AALIPSETGNDPFKAFGQMALSHAVHGLLAVEERPTLVTLRRYLEGGADALVERVLHRYF
DTHLSHWQEHAGPYLNKARDANRRARGLLAFYRERVRGEHPSTVIDGLGGLLEHEAVHFG
KMVASLMPVIVMLTSGHLEGLLSPDETDANDPRRAASIGEIIARREVLYVGLDSLSDPIV
GSAIGSMLTADLAAVAGSIYNHEAHPRPTDIFIDEAAETVSDPLIQLLNKGRGAGLRLTI
ATQTFADFAARMGSEEKARQVLGNLNGLIAMRVIDAKTQEYIAESLPAVRLCTVVKSQGS
TTASDRPLLFTGNAGERLDEAEAPLFPAALLGELPNFEYLARWPGGRVSKGRLPILGEPL
PPTGER
NT seq 1821 nt   +upstreamnt  +downstreamnt
gtgagcccctatgccaatccctggcgtccgctcttcgagttgcccgccatgctgctgtgg
accggcatcgcggccgcgtcctgggccaccgcggagctgtgggatctgcacgcggcctct
tttcggtggctcggggtcggcagtctggtgatggccttgacctggctgcccggcaccgtg
cgcggcatcaaccggcgcgattggctgcgtgggcgcccgcagcagttcatcgacccgcag
gtgtttgccgcgcgcgtgccctcctggccgggattgctgtggatgggccgggggttcgat
tgggaggcacgacatgcgcaggaggcgctggatctgatccggctcggagccgagcggttc
gcgccgcgcgatccggcccgtctgggtgcgacctggatccacggtctcggcggagccgat
gcggaagtgaccgtcccgctcgcccacaccgaaggccacctgctgatcgtcgggaccacc
gggtgcggcaagacccgcctgttcgatctcctggtcacccaggcggtgctgcgcggggat
gcggtggtgatcctcgaccccaagggcgatcggggtctgcgggccgccgccgagcgcgcc
tgtatgctggccggcacacccgaacgcttcgtctcctttcatccggcctttcccgccgct
tcggtgcgactcgatccgttgcgccacttccagcgcgccaccgaactggcgagccgggtc
gccgcgctgatcccctcggagaccggcaacgatcccttcaaggcattcgggcagatggca
ttgagccatgccgtgcacgggctgctggccgtggaggagcgcccgaccctggtgacgctg
cgccgctatctcgaaggcggtgcggatgccttggtcgaacgtgtcctgcaccgctacttc
gacacccacttgtcgcactggcaggagcatgccggcccctacctcaacaaggcccgcgat
gccaatcgacgtgcacggggtctgctcgccttctaccgcgagcgcgtgcgcggcgagcat
ccctcgaccgtgatcgacggactcgggggcctgctcgagcacgaggccgtgcacttcggc
aagatggtcgcgagcctcatgccggtgatcgtgatgctcacctccgggcacctggaaggt
ctgctctcccccgacgagacggacgcgaacgatccgcgtcgggcggcctcgatcggggag
atcatcgcccggcgcgaggtcctctacgtcggtctggacagtctctccgaccccatcgtg
ggcagtgcgatcggctcgatgctgaccgccgatctggccgcggtggcgggctccatctac
aaccacgaggcgcacccgcgcccgaccgacatcttcatcgacgaggccgccgagacggtc
tccgacccgctgatccagctcctcaacaagggacgcggggccgggctgcgtctgaccatc
gccacccagaccttcgcggacttcgccgcgcgcatgggtagcgaggagaaggcccgccaa
gtgctgggcaacctcaacggactgatcgcgatgcgcgtgatcgatgcgaagacgcaggag
tacatcgccgagagtctcccggcggtgcggctctgcacggtggtgaagagccagggctcc
acgaccgcgagcgaccgaccgctgctcttcaccggaaatgccggggagcgcctcgacgaa
gccgaggcgcccttgttcccggcggcgctgctcggggagctgcccaacttcgagtacctg
gcccgctggcccggcgggcgcgtctccaaaggccgcctgccgatcctcggcgagcccctg
ccgccaacgggcgaacggtga

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