Thiocapsa bogorovii: LT988_18500
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Entry
LT988_18500 CDS
T07840
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LT988_18500
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tbog01007
]
LT988_18500
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbog03016
]
LT988_18500
Enzymes [BR:
tbog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
LT988_18500
Amino acid related enzymes [BR:
tbog01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LT988_18500
Transfer RNA biogenesis [BR:
tbog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LT988_18500
Prokaryotic type
LT988_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
UHD15243
LinkDB
All DBs
Position
complement(4172125..4174989)
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AA seq
954 aa
AA seq
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MLDKNYDPQTLEKNWYRFWEEKGYFVPADQTGSSRAEGAGGGAYCIMIPPPNVTGSLHMG
HGFNNTIMDTMVRYHRMKGDRTLWQPGTDHAGIATQMVVERQLEAAGQTRHDLGREAFIE
RVWAWKQESGGNITRQLRRLGSSLDWQHERFTMDEGLSNAVREVFVRLFEEGLIYRGKRL
VNWDPALHTAVSDLEVISEEESGHMWDIRYPLVLPPGATGPTHLVVSTTRPETLLGDCAV
AVNPEDPRYKHLIGERVELPLTGRRIPVIADEHADPEFGTGCVKITPAHDFNDHQVWLRH
RDENAIAEQPHGGLINILTPDAAIRANQPEEGALLPVAYVGLDRYEARKLIVADLDSLGL
LAAVKEHRLQQPRGDRSGAVIEPYLTDQWYVRVAPLAEPAIAAVEDGRIRFVPDNWKNTY
YDWMRNIQDWCISRQIWWGHRIPAWYDVEGNVYVGRSEDAIRARHGFGPEVVLLQDPDVL
DTWFSSALWPFSTLGWPEHTDRLNAFYPTSVLVTGFDIIFFWVARMIMMGLKFMDEVPFK
DVYIHGLVRDAHGDKMSKSKGNVLDPIDLIDGIGLEALVEKRTRGMMQPHLAEKIAKQTR
KDFPDGIPGFGTDALRFTFAALATTGRDVKFDLGRIEGYRNFCNKLWNASRYVLMNTEEQ
DCGQAGGEVELSAADRWIRARLNATTATVTDAIEGYRFDLAAQAIYDFTWNAFCDWYLEL
SKPVLTGTAASDAAKRGTRRTLVETLETLLRLAHPIMPFITEEIWQKVSPLVGAQGDTIM
LAPYPVADAGADDPEAVAEIEWVQQVILGVRRIKGEMNIAPGKPLPVLVANASEQDRTWL
AIARPYLDFLARIESVTLLDDESAAPESAIALVGTMKLLIPMAGLIDKDAELKRLDKEIG
RLTDEIARIGQKLANPSFVDKAPAAVVDKERARLAEQSTAIGNLQAQREKIALL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgctggataagaactacgacccccaaaccctcgagaaaaactggtatcgcttctgggaa
gagaaaggctatttcgtcccggccgaccagaccgggagctcccgggccgaaggcgcgggc
ggcggagcctattgcatcatgatcccgccgccgaacgtgaccggcagcctgcacatgggt
cacgggttcaacaacaccatcatggatacgatggtgcgctatcaccggatgaaaggcgat
cgcaccctctggcagccgggcacggaccacgccgggatcgcgacccagatggtggtcgag
cgccaactggaggccgccggccaaacccgtcacgacctcggacgcgaggccttcatcgaa
cgggtctgggcatggaaacaggagtccggcggcaacattacacgccagctgcgtcgtctc
ggctcctcgctcgactggcagcacgagcgattcaccatggacgagggcctctccaacgcg
gtgcgcgaggtcttcgtgcgcttgttcgaagagggattgatctatcgcggcaagcgccta
gtcaactgggatccggcgctgcacacggcggtctccgacctcgaggtgatctccgaggaa
gagtccggccacatgtgggacatccgctacccgttggtgttgccgcccggcgcgacgggg
ccgacgcatctggtggtctccaccacccgcccggagaccctgctcggcgactgcgccgtg
gccgtcaacccagaggacccgcgctacaaacacctgatcggtgagcgcgtcgagctgccc
ctaaccgggcgccgcatccccgtcatcgccgacgagcacgccgaccccgagttcgggacc
ggttgcgtgaagatcacgcctgcgcacgacttcaacgaccatcaggtctggctgcgccac
cgcgacgagaacgcgatcgccgagcagccgcatggcggcctgatcaacatcctcaccccg
gatgccgcgatccgcgccaatcagcccgaagaaggcgcgctgctgcccgtcgcctacgtc
ggcctggaccgctacgaggcccgcaagctcatcgtcgccgatctcgactcgctcggcctc
ctcgcggcggtgaaggagcaccggcttcagcagccgcgcggcgaccgctcgggcgccgtg
atcgagccctatctgaccgatcaatggtacgtgcgggtcgcccctctggccgaaccggcc
atcgccgcggtcgaagacgggcgcatccgcttcgtgccggacaactggaagaacacctac
tacgactggatgcgaaacatccaggactggtgcatcagccgccagatctggtgggggcac
cgcatcccggcctggtacgacgtcgaaggcaacgtctatgtcggccgctcggaggacgcg
atccgcgcgcgtcacggcttcggccccgaggtcgtcctgctccaggatccggatgtactc
gacacctggttcagctccgcactctggcccttcagcacgctcggctggccggagcacacc
gatcgcctcaacgccttctatcccacctcggtcctcgtcaccggcttcgacatcatcttc
ttctgggtcgcccggatgatcatgatggggctcaaattcatggacgaggtgcccttcaag
gacgtctacatccacggcctggtgcgcgacgcccacggcgacaagatgtccaagtccaag
ggcaacgtactcgaccccatcgatctgatcgacgggatcggactcgaagccttggtcgag
aagcgcaccaggggcatgatgcagccccatctggccgagaagatcgccaaacagacccgc
aaggacttccccgacggcatccccggcttcggcaccgatgcgctgcgctttaccttcgcc
gcgctcgccaccaccgggcgcgacgtcaaattcgacctcggtcgcatcgagggctaccgc
aacttctgcaacaagctctggaacgcctcgcgctacgtcctgatgaacaccgaggagcag
gactgcggccaagccggcggcgaggtggagctctccgcggccgaccgctggatccgcgcc
cgactcaacgccaccacggccacggtgacggacgccatcgagggctaccgcttcgacctc
gccgcccaagcgatctacgacttcacctggaacgccttctgcgactggtatctggagctg
tccaagccggtgctcacagggacggccgcgagcgacgctgcaaagcgcggcacccgccgc
accctggtcgagaccctggagaccctgctgaggctcgcccacccgatcatgcccttcatc
acggaggagatctggcagaaggtctcgcccctggtcggggcccaaggcgacaccatcatg
cttgcaccctaccccgtcgccgatgcaggagccgacgacccggaggccgtcgccgagatc
gagtgggtccagcaggtcatcctcggcgtgcggcgcatcaagggcgagatgaacatcgcg
cccggcaaaccgctgccggtgctcgtcgccaacgcctccgagcaggaccggacctggctc
gcgatcgcccggccctacctggattttctcgcccgtatcgaatcggtcactctgctcgac
gacgagtcggccgcgcccgagtcggcgatcgccctggtcggcaccatgaagctcctcatc
ccgatggccggcctgatcgacaaggacgccgagctcaaacgcctcgacaaggagatcggg
cgcctgaccgacgagatcgcccgtatcgggcagaagctcgcgaacccgagcttcgtcgac
aaggccccggccgcggtggtcgacaaggagcgcgccaggctcgccgagcagtcgacggcg
atcggaaacctgcaggcgcagcgcgagaagatcgctttactgtga
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