Thiocapsa bogorovii: LT988_18975
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Entry
LT988_18975 CDS
T07840
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00061
Fatty acid biosynthesis
tbog00071
Fatty acid degradation
tbog01100
Metabolic pathways
tbog01212
Fatty acid metabolism
tbog02024
Quorum sensing
tbog04146
Peroxisome
Module
tbog_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LT988_18975
00071 Fatty acid degradation
LT988_18975
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LT988_18975
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT988_18975
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tbog01004
]
LT988_18975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbog04147
]
LT988_18975
Enzymes [BR:
tbog01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LT988_18975
Lipid biosynthesis proteins [BR:
tbog01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LT988_18975
Exosome [BR:
tbog04147
]
Exosomal proteins
Exosomal proteins of breast milk
LT988_18975
Exosomal proteins of breast cancer cells
LT988_18975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UHD15333
LinkDB
All DBs
Position
4279083..4280642
Genome browser
AA seq
519 aa
AA seq
DB search
MGTSVSPDIPARFRATAARFGESMGVCSDQGDWSYAAIDRASDGVAGALAVAGIGEGDRL
GLLCGNGAEFVIAYLGVLKAGGTLVPLNLLLNPKEMAFILADSGAVGLIHHEAFDAAAAA
AIEGLADIAVRLRIGATPSGDPAVFDFDAMMRSSEPAPVRARDPRQATAAILYTSGTTGR
PKGAMLSHANLIANADGIAQALGLTPADRILVVLPMFHAFAATVGVLTPLLHGLGVVPVP
KFDPGVISTAIGRHGASVFLGVPSLYGVLLRLDTELLAHWRSVRVCVSGGAAMPAALMTA
FEERFGIPILEGDGPTECGPVTCVNPIAGVRKTGSIGLPIPTVETRILDPEGREVADGTY
GEVCVRGPSVMQGYHHQPESTRESFFGDWFRTGDLGYRDADGYVFLVDRIKDLIITNGMN
VYPRVIEEALYAHPEVAEAAVVGDPDARHGEIPVAHVVLRTGSSATEASLRAWCREHLGR
HEVPRRLVIRDTLPKNAAGKILKRELRRAGEHERGFGSG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgggtacgagcgtctcgccggatattcccgcgcgctttcgggcgacagcggcgcggttc
ggcgagtcgatgggcgtttgctcggatcagggcgattggagctacgctgcgatcgatcgg
gcctccgacggggtggccggcgcccttgccgtcgccggtatcggggaaggcgatcggctg
gggctgctttgcggaaacggcgccgagttcgtcatcgcctatctcggtgtcctcaaggcc
ggcgggacgctggtgccgctcaacctcctgctcaaccccaaggagatggccttcatcctc
gccgacagcggggcggtcggtctcatccatcatgaggcgttcgatgcggcagccgcggcc
gcgattgaaggactggccgacatcgccgtgcggctgcggatcggcgcgaccccatcgggc
gatccggccgtgttcgatttcgacgccatgatgcgcagcagtgagcctgcaccggtccga
gcgcgcgatccgcggcaggcgactgccgcgatcctttatacctccggcacaaccggtcgt
cccaaaggcgccatgctgtcccatgccaatctgattgcgaatgcggacggcatcgcgcaa
gcgctcgggctcacaccggccgaccgtatcctggttgtactcccgatgtttcacgccttt
gcagcgaccgtcggtgtgctgacgccattgctgcatgggctcggggtcgtgcctgtgccc
aagttcgatccaggagtcatctccacggcgatcggtcgtcatggcgccagcgttttcctc
ggcgtcccgagcctctatggcgtcctgcttcggctcgatacggagctgctcgcgcactgg
cgcagcgtgcgtgtctgcgtgagcggcggggcggccatgcccgccgcgctgatgacggcg
tttgaagagcgcttcgggattccgatcctggaaggagacggtccgaccgaatgtggccct
gtgacctgcgtaaacccgattgcgggggtgcgcaaaaccggctcgatcgggttgccgatc
cccacggtcgagacccgaatccttgatcccgagggtcgcgaggttgctgacgggacctac
ggcgaggtctgtgtccgcggtcccagcgtgatgcagggctatcatcaccagcccgagtcg
acacgggagagcttcttcggggactggtttcgcaccggcgatctcggctatcgcgacgcg
gacggctatgtttttctggtcgaccgcatcaaggacctcatcatcaccaacgggatgaac
gtctatccgcgggtgatcgaggaggcgctttacgcgcatccggaggttgcggaggcggcg
gtcgtcggcgatccggatgcacgtcacggcgagatcccggtcgcacatgtcgtcctgcgc
accggctcctcggcaaccgaggcgagtctgcgggcctggtgtcgggagcatttggggcgg
catgaggtgccgcgccgtctggtcatccgggacacccttccgaagaacgcggcgggcaag
atcctcaagcgcgagctgcggcgcgccggcgagcatgagcgggggttcggctcaggctga
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