Thiocapsa bogorovii: LT988_20600
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Entry
LT988_20600 CDS
T07840
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbog03032
]
LT988_20600 (gyrA)
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_20600 (gyrA)
Enzymes [BR:
tbog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LT988_20600 (gyrA)
DNA replication proteins [BR:
tbog03032
]
Prokaryotic type
DNA Topoisomerases
LT988_20600 (gyrA)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LT988_20600 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPR_SYO1
Motif
Other DBs
NCBI-ProteinID:
UHD15630
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Position
4625935..4628586
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AA seq
883 aa
AA seq
DB search
MADFAREVLPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMSEQGNVWN
RAYRKSARVVGDVMGKYHPHGDSAIYDTMVRMAQRFSMRYLLVDGQGNFGSVDGDPPAAM
RYTEVRMTRIADALLDDLDKDTVDFIPNYDNTEHEPVVLPARFPNLLVNGSSGIAVGMAT
NIPPHNLREVIDACLATIDNPSITIEELMVLVPGPDFPTAALINGVRGIREAYRTGRGRA
VIRARTMIEVQKRSGREAIVVTELPYQVNKARLLERIAELVKEKKIEGIAQDGLRDESDK
DGMRVVIELKRDAYAEVLLANLYQHTQMQQVFGINMVALVDGQPRTLNLKQILEYFIRHR
RDVVTRRTLFELRKARDRAHVLEGYAIALANIDEIIALIKASANPAEAREGLMARTWAPG
SVTGMLERAGAEQTRPEELESAFGLVDGGYRLSERQAKAILDLQLQRLTGLEQDKILDEF
KEILDKIAALLMILSESDRLMDVIREELTAIRDQFGDDRRTEIQVDHTDLTLEDMIAPEE
VVVTMSHQGYVKAQPISDYQAQRRGGKGKSATSFKEEDFIDRIFVANSRDTVLCFSSRGR
VYWLKVYELPQAGRGARGRPMVNLLPLEQGERINAVLPVRDYESGYFVFMATSAGTVKKT
PLDDFSRPLSRGIIAIDLREDEYLIGVAITDGKQDLMLFTSAGKAVRFSEGAVRAMGRTA
HGVRGVSLAPGQKVISLLVPEPGTVLSVTENGYGKRTRVEDFPTKGRGTKGVIGISTSER
NGAQVGAVLVRPGDEIMLITEGGTLIRTPIDQIPVVGRSAQGVKLINLGEGERLVYLERI
VALEGEKEGNGDLAEHQDPDEANDEPNDDDQSPDADPDSDPQA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcgcgagagaagttcttcccatcaatctcgaggacgagatgcgtcagtcc
tacctcgattacgccatgagcgtgatcgtggggcgcgcgcttcccgatgtgcgcgacgga
ctcaagccggttcaccggcgtgtcctcttctcgatgagcgagcagggcaacgtctggaac
cgtgcctaccggaagtctgctcgcgtggtcggcgacgtcatgggtaaataccaccctcac
ggtgactcggccatttacgacaccatggtccgcatggcgcagcgcttctcgatgcgctac
ctgctggtggacgggcagggcaacttcggctcggtcgacggggatccccccgcggccatg
cgctataccgaggtgcggatgacgcgcatcgccgacgcactgctcgatgacctcgacaag
gacacggtcgacttcatacccaactacgacaacaccgagcatgagccggttgtcctcccg
gcgcgcttcccgaatctgctggtgaacggctcatccggcatcgccgtgggcatggccacc
aacatcccgccgcacaacctgcgcgaggtcatcgatgcctgtctggcgaccatcgacaac
ccgtcgatcaccatcgaggagctgatggtgctggtgcccggcccggatttcccgaccgcg
gcgctgatcaacggcgtgcgcggtatccgcgaggcctaccggaccggtcgcggccgagcg
gtcatccgtgcccgtaccatgatcgaggtccagaagcgcagcgggcgcgaggcgatcgtc
gtcaccgagctgccctaccaggtcaacaaggcgcgtctgctcgagcgcatcgccgagctg
gtgaaggaaaagaagatcgagggcatcgcccaggacggtctgcgcgacgagtccgacaag
gacggcatgcgcgtcgtcatcgagcttaaacgcgatgcctacgccgaggtgctgctggca
aacctctaccagcacacccagatgcagcaggtcttcggtatcaatatggtcgccctggtc
gacggccagccgcggactctgaatctcaagcagatcctcgaatacttcatccgtcaccgc
cgcgacgtggtgacgcgccgcaccctcttcgagctgcgcaaggcccgcgaccgcgcccac
gtcttggaaggctatgcgatcgcgttggcgaacatcgacgagatcatcgccctgatcaag
gcatcggccaacccggccgaggcgcgcgagggactgatggcgcggacctgggcgcccggc
tcggtgaccggcatgctcgagcgtgccggcgcggagcagacccgccccgaggagctcgaa
tcggccttcggtctggtcgacgggggatatcggctgagcgagcgccaggccaaggcgatc
ctggatctgcagcttcaacgcctgaccgggctggagcaggacaagatcctcgacgaattc
aaggagatactcgacaagatcgccgccctactgatgatcctctccgaatccgatcgcctc
atggacgtgatccgcgaggagctcacggcgatccgcgatcagttcggcgacgaccggcgc
accgagatccaggtcgaccacaccgacctcaccctggaggacatgatcgcgcctgaagag
gtcgtggtgacgatgtcgcatcagggctacgtcaaggcccagccgatcagcgactatcag
gcgcagcggcgcggcggcaagggcaagagcgcaacctcctttaaggaagaagacttcatc
gaccgcatcttcgtggccaactcgcgcgacaccgtgctctgcttctccagtcgcgggcgc
gtgtactggctcaaggtttacgagctgccgcaggccggtcgcggcgcgcgcggtcggccg
atggtcaacctgttgccgctggagcaaggcgagcgcatcaacgccgtgctgcctgtgcgc
gactacgagtccggctatttcgtcttcatggcgaccagcgccggcacggtcaaaaagacc
ccgctcgacgacttctcgcggcccctctcgcgcggcatcatcgcgatcgatctgcgtgaa
gacgagtatctcatcggcgttgccatcaccgacggcaagcaggacctcatgctcttcact
tccgccggcaaggcggtgcgtttcagcgagggtgcggtccgcgcgatgggtcgaaccgcc
cacggcgttcgcggcgtgtcacttgcgccggggcaaaaggtgatctccctgctcgtgccc
gagcccggcaccgtgctcagcgtgaccgaaaacggctacggcaagcgcacccgtgtcgag
gacttcccgaccaagggtcgcggcaccaagggtgtgatcggcatcagtacctccgagcgc
aacggtgcccaggtcggcgccgtgctggtgcgtcccggcgacgagatcatgttgatcacc
gagggcggcacactgatccgcaccccgatcgatcagattccggtcgtgggtcgcagtgcg
cagggcgtgaagctgatcaatctcggcgagggcgagcggcttgtctatctcgagcggatc
gtcgcgctggagggcgagaaggaaggcaatggggatcttgccgagcatcaagatccggac
gaggcgaacgacgagccgaacgatgatgatcagtctcccgatgccgatcccgacagcgat
ccgcaggcatag
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