Thiocapsa bogorovii: LT988_21180
Help
Entry
LT988_21180 CDS
T07840
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00550
Peptidoglycan biosynthesis
tbog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT988_21180 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tbog01003
]
LT988_21180 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
LT988_21180 (pbpC)
Enzymes [BR:
tbog01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LT988_21180 (pbpC)
Glycosyltransferases [BR:
tbog01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LT988_21180 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LT988_21180 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UHD15743
LinkDB
All DBs
Position
4769711..4771816
Genome browser
AA seq
701 aa
AA seq
DB search
MLIKPLAALGALLLLLVGGRAGLDALIETTPPPEMRTSTSTLMLDRDGRLLRAFTVADGR
WRLPVDLNTVDPTYVAMLLAYEDRRFASHPGVDVLALVRAGWQLLSQGRIRSGGSTLTMQ
LVRLLETRSTRNAGGKLRQIRAAIWLERRLDKDAILETYLTLAPYGGNLEGVRSASLAWL
GKEPRRLTPAEAALLVALPQSPETRRPDRHPEAARRARDRVLEHVRLAGIIDADEAARAR
AEPIPTTRLDAPMLAAHLTDRLRRAQPERPVHRLTLDAGLQERLEQLANARAATLGPRVS
MGILVADHGRGEVLASVGSAGLFETARQGHVDMTRAVRSPGSTLKPLIYGLAFEDGRAHP
ESLIEDRPSAFGGYVPANFDLGFQGTVTVRRALQLSLNIPAVKLLDAVGPARLVARMRRA
GAHPVLPDLSPPGLAVGLGGVGVSLTDLVGIYAAIARGGRPVILRETLDEEGAGSGSLGV
VGVPADTGADAGAPVLDARAAWYVASILAGAPAPTNSAPGVLAFKTGTSYGYRDAWAIGF
DGRHVAGVWVGRPDGAPVPGLAGIDAAAPVLVEVFARLGPTTPLPPAPPGILSSTSAELP
PPLRRVQDPRAASRGGADAPQIAYPPEGARVELGLGGGRAADLVLRVRDGVPPFTWFIDG
APVAREPYARTARWTPRGPGYVAISVVDARGGASRVNVFLQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattaagccgcttgcggccctcggcgccctcttgctcctgttggtgggcggccga
gcggggttggatgcgctgatcgagaccacgccgccgccggagatgcggacctccacctcg
accctgatgctggatcgcgacgggcgtctgctgcgcgccttcacggtcgccgacggacgc
tggagactgccggtcgatctgaatacggtcgatccgacctatgtggcgatgcttctggcc
tacgaggatcgccgcttcgcgtcgcatccgggtgtcgatgtactcgccctggtgcgtgcc
ggctggcagctcctgagtcagggaaggattcgttcaggcggctcgaccctgaccatgcaa
ctggtgcggctgctggagacgcgctcgacgcgcaatgcaggcggcaagcttcggcagatc
cgcgccgcgatctggctggagcgacggctcgataaagacgccatcctggaaacctatctg
accctcgccccttacggcggcaatctcgaaggtgtgcgctcggcctcgctcgcatggctc
ggcaaggagccgcgccgcttgacaccggccgaggcggcgttgctcgtcgccttgccccaa
tcacccgagacacgccggccggatcggcaccccgaggccgcccgtcgggcgcgtgaccgc
gtgctcgagcatgtgcgtttggccgggatcatcgacgcggacgaggcggcgagggcccgt
gccgagcccatcccgaccacacgcctggatgccccgatgttggcggcgcatctcaccgat
cgactcaggcgcgcgcagcccgagcgcccggtccatcgcttgaccctggatgcgggtctg
caggagcgcctcgagcagctcgcgaacgcgcgtgccgccacgctcggtccgcgggtgtcg
atggggatcctggtcgccgatcacgggcgcggcgaggtcctcgccagcgtgggttccgcc
ggtcttttcgagacggctcgacagggtcatgtcgacatgacgcgcgccgtgcgttccccg
ggctcgacgctgaagccgctcatctacgggctggccttcgaggacggccgggcccatccg
gagagcctgatcgaggaccgcccgagcgccttcggcggctatgtcccggccaacttcgac
ctgggctttcagggtacggtcacggtgcgtcgggctctgcagctctcgctcaacatcccg
gcggtgaagctgctggatgcggtcgggcctgcgcggctggtcgcgcgcatgcgccgcgcg
ggtgcgcatccggtgcttcccgatctttcgccgcccgggctcgcggtcggcctgggcggc
gtcggcgtgtccttgacggacctcgtcggcatctatgccgccatcgcccggggcggtcga
ccggtgatcttgcgggagacgctcgacgaggagggcgcgggctccggatcgctcggcgtc
gtcggcgtccctgccgataccggagcggacgccggggcacccgtgctcgatgcgcgtgca
gcctggtatgtcgcctcgatcctcgccggcgccccggcaccgaccaacagcgcgccgggc
gttctcgcattcaagaccgggacctcctacggttaccgcgatgcttgggcgatcgggttc
gacgggcgtcatgtggccggggtctgggtcggtcgtcccgacggtgctcccgtgcccggc
ctcgccggcatcgatgccgccgcgcccgtgctggtcgaggtctttgcacgtctcggcccg
acgacgccgctgcctcccgcgccacccggcatcctgagcagcacctccgcggagctgccg
ccgccgctgcgccgcgttcaggatccgcgtgcggcctcgcgcggtggtgccgacgcgccg
cagatcgcctatccacccgagggtgcgcgtgtcgagttgggactcggtggaggtcgggcc
gccgatctggtcttgcgggttcgcgacggtgttccgcccttcacctggttcatcgacggc
gcgccggtcgcgcgcgagccttacgcccgcaccgcccgttggacgccccggggccccgga
tacgtcgccatctcggtcgtcgatgcccgcggcggtgcatcgagggtgaatgtctttcta
caatga
DBGET
integrated database retrieval system
