Thiocapsa bogorovii: LT988_21645
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Entry
LT988_21645 CDS
T07840
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LT988_21645 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tbog01007
]
LT988_21645 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbog03016
]
LT988_21645 (serS)
Enzymes [BR:
tbog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LT988_21645 (serS)
Amino acid related enzymes [BR:
tbog01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LT988_21645 (serS)
Transfer RNA biogenesis [BR:
tbog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LT988_21645 (serS)
Prokaryotic type
LT988_21645 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
HALZ
Motif
Other DBs
NCBI-ProteinID:
UHD15828
LinkDB
All DBs
Position
4861994..4863268
Genome browser
AA seq
424 aa
AA seq
DB search
MLDPRLLRNQPDEVAAHLLRRGLVLDTARIESLEAERKGLQVEVQSLQNERNTRSKAIGK
AKATGADIGPLLAEVSDLGERLKVSEARLDEIQAAVEEIALGLPNLPDASVPDGRDEREN
REERRWGEPPSFGFQPRDHVDLGAFNGWMDFDLAAKLTGSRFVVLSGPLARLHRALIQFM
LDTHTAEHGYTEVYVPYLVNAESLYGTGQLPKFEQDLFKVPGERDLYLIPTAEVPVTNLV
RNLILEAGELPRKWVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQAVRPEGSLQALE
DLTRHAESILQRLGLAYRVVSLCCGDLGFSSRKTYDLEVWLPGQQTYREISSCSNFGDFQ
ARRLQARWRNPETGKPELLHTLNGSGLAVGRTLVAVLENFQKADGRIVIPEVLRPYMGGQ
DVLG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccacgcctgctgcggaaccaaccggacgaggttgccgcgcaccttttacgt
cgcggtctggtcctggataccgcgcgcatcgagtcgttggaggccgagcgcaagggcttg
caagtcgaggttcagtcgctgcaaaacgagcgcaacacccgctcgaaggcgatcgggaag
gccaaggcgaccggcgccgacatcgggcccttgctggccgaggtctccgacttgggcgag
cgtctgaaggtctcggaggcgcggctcgacgagatccaagccgcggtcgaggagatcgca
ctgggactgcccaacctgccggatgccagcgtgccggacgggcgcgacgagcgcgagaat
cgcgaggagcgtcgctggggcgagccgccgagcttcggcttccaaccgcgtgatcatgtc
gacctcggtgccttcaacggatggatggacttcgacctcgctgcgaagctgacgggctcg
cgcttcgtggtcttgtccggtccgctcgcgcgtctgcatcgcgcgctgatccagttcatg
ctcgacacccacaccgcagagcacggctataccgaggtctatgttccctacctggtgaac
gccgagagcctctacgggaccggccagcttcccaaattcgagcaggatctcttcaaggtc
ccgggcgagcgcgatctctatctgatcccgaccgccgaggtgccggtcaccaatctggtt
cgcaatctcatcctcgaggcgggcgagctgccgcgtaaatgggtcgcgcacaccccctgt
ttccgtagcgaggccggctcgtacggcaaggacacccgcgggatgatccgccaacatcag
ttcgagaaggtcgagctggtccaagccgtgcggcccgaagggtcgctccaggccctggaa
gacctgacccggcatgccgagtccattctgcaacgtctcgggctcgcctatcgcgtggtc
tcgctctgctgcggcgatctcggcttttcctcgcgcaagacctacgatctcgaggtctgg
ctgcccggtcagcagacctatcgcgagatttcctcctgcagcaacttcggcgactttcag
gcccgtcgactccaagcccgctggcgcaatcccgagaccggcaaacccgagctgctccac
acgctcaacggctccggcttggcggtcggccgcacgctggtcgccgtgttggagaacttt
cagaaggcggacgggcgcattgtcattcccgaggtacttcggccctacatggggggccag
gacgtactggggtaa
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