Thiocapsa bogorovii: LT988_22565
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Entry
LT988_22565 CDS
T07840
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LT988_22565 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tbog01007
]
LT988_22565 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbog03016
]
LT988_22565 (pheT)
Enzymes [BR:
tbog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LT988_22565 (pheT)
Amino acid related enzymes [BR:
tbog01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LT988_22565 (pheT)
Transfer RNA biogenesis [BR:
tbog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LT988_22565 (pheT)
Prokaryotic type
LT988_22565 (pheT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
UHD16000
LinkDB
All DBs
Position
5060438..5062816
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AA seq
792 aa
AA seq
DB search
MRFSEAWLREWVNPPVDTRQLADQLSMAGLEVDAVEPAAPAFSGVRIGWVQSVAPHPDAE
KLRICRVDLGEDAFLQIICGAANVAEGMKVPVATVGAVLPGDFKIKKAKLRGVESYGMIC
SAKELGLAETSEGILALPADAPVGEDIRDWMALDDHCIEVDLTPDRGDCLGIAGLAREVA
VINRAPLATPAIQPVAPLHDRSLPVHLQAPAACPRYVCRVIRNIDPSATTPWWMQERLRR
GGIRAISPVVDVTNYVLLELGQPMHGFDLAKLDGEICVRMAVEGERLALLNGEEATLRAD
TLVIADAGRAVALAGIMGGSGTAVGSETRDVLLESAFFAPLALSGKARSYGLHTDSSHRF
ERGVDPQLQVRAIERATRLLIAIVGGEPGPVIEAVSQTELPEPRMLTLRRSRVAQVLGLA
LPDDTILDILTRLDLNTEATAEGWLVTPPSARFDLVQEVDLIADIGRIYGYDRIPVSHAS
SASVTGATPETDFDLDRARLALVDRGFHEVITYSFVSPEIQALVDPKQEVLRLANPLSAE
LSTMRTSLWPGLIQTARYNQARQQERVRIFESGLRFRVGADDLTQTQGLAGLITGSPDPE
QWGLPSRAADFFDLKADVEALLSLTGAPGRFNFVPGTHPALHPGQTARVVCDGRGIGLLG
MLHPSLAAQLDIMGDAYLFELDVAPLSVGALPKHASISRFPSIRRDIAIIVDAAVTYGQI
ADCIRDTETELLRDLVLFDLYTGKNIESGRKSLALGLILQASSQTLTDGVIEDTVGRILA
RLASEFGARLRD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcagcgaggcgtggttgagggagtgggtgaaccctccggtcgacacccgacaa
ttggccgaccagctcagcatggccggcctcgaggtcgatgcggtcgaacccgcggctccg
gccttcagcggtgtgcggatcggctgggtgcagtccgtcgcaccccatccagacgccgag
aagctgcggatctgccgggtcgatctcggcgaggatgcgtttctccagattatctgcggg
gcggccaacgtcgccgaaggcatgaaggtcccggtcgcgaccgtcggagccgtgctgccc
ggcgacttcaagatcaagaaggctaagttgcggggtgtcgagtcctacggcatgatctgc
tcggccaaggagctcggtcttgccgagacctccgagggcatcctggccctgccggcagat
gcgcctgtgggcgaagacatccgcgactggatggcactcgacgatcactgtatcgaggtc
gatctgaccccggatcgcggcgactgtctcggcattgccgggcttgcgcgcgaggtcgcc
gtgatcaaccgtgcgccgctcgccacacccgcgatccagccggtcgcgcctctgcatgac
cggtctctaccggtccacctccaggccccggctgcctgcccgcgctacgtttgccgagtc
atccgcaacatcgatccgagcgcgaccacgccctggtggatgcaggagcgcctgcgtcgc
ggcgggatccgggccatcagcccggtggtcgacgtgaccaactatgtcctgctcgagctg
ggccagccgatgcacggcttcgatctcgccaagctggacggcgagatttgcgtgcgcatg
gcggtggagggcgagcgtctcgccctgctcaacggcgaggaagcaacactgcgcgcggac
accctggtgatcgccgatgccggacgtgccgtcgcattggccgggattatgggcgggtcc
gggaccgcggtcggttccgaaacccgcgacgtgctgctcgaaagcgccttcttcgcgccg
cttgccctcagcggcaaggcgcggtcttacggcctgcatacggattcgtcgcatcggttc
gagcgcggggtcgatccccaactccaagtccgcgcgatcgagcgtgcgacccgtctgttg
atcgcgatcgtcggaggtgagccgggccccgtgatcgaggcggtatcgcagaccgagcta
cccgagcctcggatgctgacgctccgtcggtcgcgtgtcgctcaggtgctcggactcgcg
cttcccgacgacaccatcctcgatattctgacgcgtctggatctgaacacggaggcgacc
gccgaagggtggctggtcacgccgccgagtgcccgcttcgacctggttcaagaggtcgac
ctgatcgccgatatcggacgcatctacggttacgatcgaatcccggtgagtcacgcgagc
tcggcatccgtgacgggtgcgaccccggagacggatttcgatctggatcgcgcccgtctc
gcgctggtcgatcgcggtttccacgaggtcatcacctacagcttcgtgagtcccgagatt
caagcgttggtcgaccccaagcaggaggttctgcgtcttgcgaatccgctgagcgccgag
ctctccaccatgcggaccagcctctggcccggcttgatccagaccgcgcgctacaatcag
gcgcggcaacaggagcgggtgcgcatcttcgagtccggtctacgctttcgagtcggcgcg
gacgatctgacccagacgcagggtctcgcgggtctcatcaccgggagcccggatccggaa
cagtggggtttgccgagccgcgcggcggacttcttcgatctgaaggccgatgtcgaggcc
ctgctgtcactgaccggcgcaccggggcgcttcaacttcgttcccggcacgcatccggcg
ctgcaccccggtcagaccgcgagggtggtctgtgacgggcgaggcatcggtctgctcgga
atgcttcatccgagtctggccgcacagctcgacatcatgggcgatgcctatctgttcgag
ctggacgtcgcgcccctgagcgtcggcgcactgcctaagcacgcgtccatctcgcgcttc
ccgagtattcgccgagacattgcgatcatcgtcgacgcggcagtgacttacgggcagatc
gcggactgtattcgcgacacggagaccgaacttctacgcgatttggtcctgttcgacctc
tacaccggcaaaaacattgaatcgggcagaaaaagtctcgctcttggattgattttacag
gcttcttctcagacacttacagatggagtcattgaagacacggtggggcggatcctagcc
cgcctcgcttcggaatttggcgcaagattgagggactga
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