KEGG   Thiocapsa bogorovii: LT988_23085
Entry
LT988_23085       CDS       T07840                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
tbog  Thiocapsa bogorovii
Pathway
tbog03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT988_23085 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbog02044]
    LT988_23085 (tssM)
Secretion system [BR:tbog02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT988_23085 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Rad17
Other DBs
NCBI-ProteinID: UHD16098
LinkDB
Position
5181482..5185042
AA seq 1186 aa
MKKLFAFIGKRWFLSLLGTIALAILVWFAGDLIAIGGRTPMASPVMRLAVIGSLFGVWGL
WQIGSAVRARLRNRQLVDRLAASQANEADPAEAASAEELAVLNERFQDALSLLKGSEVRH
RLGGRWVYQLPWYLIIGPPGCGKTTALSNSGLRFPLAEKVGKDPIQGVGGTRNCDWWFAE
DAVLLDTAGRYTTQDSYEQVDSAAWQGFLGMLKKHRPRRPINGVLVAVSLADLLQQSPTE
RAAHAVAIKKRLQELYTSFKIRFPVYVLFMKADLVAGFMEYFADLGKEAREQVWGATFAL
DDEGIGPAPVDGLREEYKGLVDRLAQRRLARLQDERDPRKRSLIFAFPEQFAALEDLLDE
FVRDIFTPSRYEVRPLLRGVYFTSGTQTGTPIDRVLAGIAANFGLARQGQQAFEGTGRGY
FLARLFRDLVFPEAGLAGLNPRLERRRRWLRNGAYAGAIGLALVAAAAWTTSYSRNQAYT
EEVDAALVEIDAQIDALSLTERDPVALLPLLDAARHVPGGYADRDRSVPLLSGLGLYQGN
KLGPEAERAYQRVLLKALLPPVMLRLEDQVREAGGDPEFLYDVLRVYLMLDSPEHYDAET
VQYWVSRDWDRNLPRTTTTEERESLKDHLQALLERRPVPLPLELDAGLVAQSRDILNRAP
LAERVYERLKSDGLGVAFSDFSISDAAGDYAKLVFERRSGRPLNEGIPALYTYDGYHQGF
ADQSQRLIDATAEETWILGSQARLQPGSEQARRLVDDVRLLYMRDYVDAWTDLLQDIDIV
PPRDIHHAAEIARILADPEQSPLRRLLTAAAMQTELDRRLDEPRAVDDENAAASPGFLAR
VDRYFGDGEKADALIADDEAPESYVTRRFSWLHDLVLAPEGQAVPIDKALGLLDQMHLQL
KSVGAAASSGRGVLAAGESAEIADVKRVAAEMPEPVSRVMATLAQDSSDIVSGGMRSQLN
RIWTAEVLPFCREAIHDRYPFDRGSSRETTLHDFGRLFAPDGLFDLFFKENLSQLADTSG
ARWRWLGSGIGISDEVLAQFQRAAVIREAFFLAGAKLPAVEFELEPVSLDARAQQLILDI
GGQIVDYRQGPPTPHQLKWPSPLAPGRVRLVFVDGAGGRPSVTYSGPWAWFRLLDSSNMR
STSQQELFRVGFSLAGFSAQFDLRAVSVRNPFKLSELRGFRCPDRL
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgaaaaaacttttcgcattcattgggaaacgttggtttttgagtctgctcgggacaatc
gccttagcgatattggtttggttcgcaggcgatctgatcgccatcggcggtcgcacgccg
atggcgtcgcccgtcatgcgtcttgcggtgatcggctctttgttcggcgtttgggggctc
tggcagatcggttcagcggttcgtgcgcggctgcgcaatcgtcaactggtcgatcgtctg
gccgcatctcaagcaaacgaagctgatcccgccgaagcggcttcggccgaagagttggcg
gtgctcaacgagcgctttcaagacgcactgagtttgctgaagggttcggaagtgcggcat
cggctgggagggcgatgggtgtaccagttgccctggtatctcatcatcgggccgccgggc
tgtggtaagaccacggcgctatcgaactccggcctgcggtttccgctggcggagaaggtc
ggaaaggatcctattcaaggcgtcggcggcacccggaactgcgattggtggtttgccgag
gacgcggtgctgctggataccgccggtcgttataccacccaggatagctatgagcaggtc
gatagcgccgcctggcaaggctttctggggatgttgaaaaagcatcgcccgcggcgcccc
atcaacggcgtgctggttgcggtcagtctggctgacctgttgcagcagtctccgaccgag
cgggccgcgcacgcggtcgctatcaaaaagcgcctgcaagagctgtatacaagtttcaag
atccgttttccggtgtatgtgctcttcatgaaggccgatcttgtagccggtttcatggag
tacttcgccgacctcggcaaggaggcccgagagcaggtttggggggcgaccttcgctctt
gacgacgaaggcatcggtccggcgccggttgatgggttaagggaggaatacaagggactg
gtcgaccgcctggcccagcgtcggctcgctcgtttgcaggacgagcgtgatccgcgcaag
cgcagcttgatcttcgccttcccggagcagtttgcagcgctcgaagacctactcgacgag
ttcgtacgcgatatcttcacccccagccgttacgaggttcgtccgttgctacggggcgtc
tacttcaccagcggcacccagaccggaacaccgatcgaccgcgtccttgccggtatcgcg
gcaaatttcggtctggcgaggcagggacagcaagccttcgaagggaccgggcgcggctat
tttctggcgcggctgtttcgtgatctggtgtttccggaggctgggctggccgggctcaat
ccgcgcctcgagcggcgtcgacgttggctgcgcaacggtgcctatgcaggggctatcggc
ttagcgctagtcgccgccgcggcatggaccaccagctacagccggaatcaggcctacacc
gaggaggtcgacgccgcactggtcgagatcgatgcgcagatcgacgccctttcgttgacc
gaacgcgacccggtcgcattgttgcccctccttgatgccgcgcgccatgtgcccggtggt
tacgccgatcgcgaccgcagtgtgcccttgttgtcggggctgggactctatcagggaaac
aagctcggtcccgaggccgaacgtgcctaccagcgggtattactgaaggccttgctgccg
cctgtcatgctgcgtctggaagaccaggtgcgtgaggccggcggggaccccgagttcctt
tacgacgtgctgcgagtgtacctgatgctcgacagcccggaacactatgacgccgagacg
gtgcaatactgggtcagccgcgattgggatcgcaacctgccaaggacgacaacaacagag
gagcgcgaatcgctgaaggatcatctgcaggcgctactagaacggcgccccgtgccactg
ccgcttgagctcgatgccgggttggtcgctcagtcccgcgacattcttaatcgcgcgccg
ctcgccgagcgcgtttacgagcggctcaagagtgatggcctcggcgtcgcgttttcggat
ttctccatcagtgacgcagccggcgactatgccaaattggtcttcgagcgacgcagtggg
cgcccgcttaatgagggcatacccgcgctctacacctacgacggttaccatcagggtttc
gcggaccaaagccagcgactgattgacgcgactgccgaggagacctggatcctgggttcg
caagcgcggttgcagccgggttccgaacaggcacgccgcctggtcgacgatgttcggctc
ttgtacatgcgtgactacgtggatgcctggactgacctgctgcaagacatcgacatcgtg
ccgccgcgcgacattcaccacgcggccgagatcgcgcgaatccttgccgatccggagcaa
tccccgctccggcgcttgctgactgcagccgcgatgcaaaccgagctggatcggaggctt
gatgagccacgggcagtagatgacgaaaacgctgcggcgtcccccggcttcctcgcccgc
gtcgatcgttacttcggtgacggcgagaaggcagatgcgttgatcgcggacgacgaggcg
cccgagtcctacgtcacacgccgcttcagttggttgcatgacctggtgctggcgccggag
gggcaggctgttccgatcgacaaggcgctcgggcttctagaccagatgcatctgcagctc
aaatcggttggtgcggcggcgagctccgggcgcggcgtgctcgccgccggcgagagtgcc
gagattgcggatgtgaagcgcgtcgcggccgagatgcccgaacccgtctcgcgcgtaatg
gcaaccttggcgcaagacagctccgacatcgtctcgggcggcatgcgttcccaactgaat
cggatctggacggcggaggtcttgccgttttgtcgtgaagcgatccatgaccggtatccg
ttcgatcggggcagctcgcgcgagaccactctgcacgactttggccggctgtttgcacct
gacggactgtttgacctgttcttcaaggagaatctgagccaactggcggatacctccggt
gcgcgctggcgttggctcgggagtggaatcggcatctccgacgaggtgctggcgcagttc
cagcgtgctgccgtgattcgagaggcgttttttctagccggcgccaagctgccggccgtg
gagttcgagctcgaaccggtctcgttggatgctcgggcgcagcaactgattctcgatatc
ggcggacagatcgtcgactatcggcagggaccgccgacgccgcatcagctgaaatggccg
tctccgctcgcaccggggcgcgtccgcttggtcttcgttgatggtgcaggtggacggcca
agtgtgacctattccggcccctgggcctggtttcggctgttggactcttcaaacatgcgt
tccacgagtcagcaagagctgttccgggtcgggttttcccttgccggcttcagtgcccag
ttcgacctgcgtgcggtgagtgttcgcaacccgttcaagttgagcgagctcagggggttc
cgatgtccggaccgcttatag

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