KEGG   Thiocapsa bogorovii: LT988_23205
Entry
LT988_23205       CDS       T07840                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbog02044]
    LT988_23205 (tssC)
Secretion system [BR:tbog02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT988_23205 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 TssC DED DUF7269
Other DBs
NCBI-ProteinID: UHD16122
LinkDB
Position
complement(5210633..5212126)
AA seq 497 aa
MAETEKQAESAVQLETAPAGDFASLLQQEFKPRSDRAREAVQDAVHTLAAQALEQTGLIS
DDAVRTIESIIAEIDRKLTQQVNLILHHQDFSQLEGSWRGLHYLVNNTETDEMLKIRVMN
ISKKEIHKNLKKFKGTAWDQSPIFKKVYTEEYSMFGGEPFGCLVGDYYFDHSPPDVELLG
QMAQISAAAHTPFITGADPGVFQMESWQELSNPRDLTKIFQTPEYAAWKSLRESEDSRYI
GLAMPRFLSRLPYGAKTDPVEEFDFEEETAAGDHSRYTWSNAAYAMAVNINRAFKLYGWC
SRIRGVESGGAVEGLPVHTFPTDDGGIDMKCPTEIAIDDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPFEYDDPDATANANLAARLPYLFAVCRFAHYLKAIVRDKVGSFKERED
MEKWLNKWINKYVEPNPANASEVDKARKPLAAAKVVVEEVEGNPGYYTSKFYLRPHYQLE
GLTVSLRLVSRLPSEKG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggctgagaccgagaaacaagccgaatccgcggtccaacttgagacggcgccggcaggg
gactttgcttcacttctgcagcaagagttcaaaccgcgatcagaccgcgcaagagaggca
gtccaagacgcggttcacacccttgcggcccaggcgttggaacaaaccgggctcatttcg
gatgacgcggttcggaccatcgaatcgatcatcgcggagatcgatcgcaaactcacccag
caggtcaatctgatcctgcaccaccaggatttcagtcagttggaaggcagttggcgggga
ttgcactaccttgtcaacaacaccgaaacagacgagatgctcaagattcgcgtcatgaac
atttcgaaaaaggaaatccataaaaatctgaaaaaattcaagggcaccgcttgggatcaa
agccctatttttaagaaggtctacacggaagaatacagcatgttcggcggcgaaccattt
ggctgcctggttggtgactattactttgatcacagtccgccagacgtcgagctactggga
cagatggcgcagatctccgctgccgcacatactcccttcattaccggcgccgatccgggc
gtatttcagatggagtcgtggcaagagttgagtaacccacgcgatctaacaaaaatattc
cagaccccggagtatgccgcctggaagtctttgcgtgaatccgaagactcgcgctacatc
ggcttggccatgccgcggtttctatccagattgccttacggagccaagaccgatccggtc
gaagagttcgacttcgaagaggagactgccgccggagaccattcgcggtatacctggtcg
aatgcagcttatgccatggccgtgaatatcaatcgggcattcaaactttacggctggtgc
tcccgtattcgcggtgtggaatcgggcggtgcggtcgaaggtttgccggtgcacaccttc
ccgaccgacgacggcggcatcgacatgaagtgccccacagaaatcgcgatcgacgatcgg
cgggaagctgagctggccaagaacggattcatgccgctgctgcataagaagaacaccgat
tttgccgcgttcatcggagcgcaatcattgcaaaaacccttcgagtacgatgacccggac
gcaactgcaaacgccaacctggccgcacgtttgccctacttgttcgccgtctgtcgattc
gcgcattacctcaaagcgattgtccgagacaaggtcggatcgtttaaggagcgcgaagac
atggagaaatggctcaacaaatggatcaacaaatacgtcgaacccaatccggccaatgcg
tccgaagtcgataaggcacgcaaaccgctcgcagccgcgaaggtcgtcgtggaagaagtc
gagggcaaccccggctactacacctccaagttctatctccggccacactatcagttggag
ggtttgacggtatcgctacgcctcgtgtcgcgacttccctcggaaaagggctga

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