Thiocapsa bogorovii: LT988_23335
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Entry
LT988_23335 CDS
T07840
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT988_23335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_23335
Enzymes [BR:
tbog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LT988_23335
DNA repair and recombination proteins [BR:
tbog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT988_23335
Prokaryotic type
LT988_23335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UHD16144
LinkDB
All DBs
Position
5240101..5240778
Genome browser
AA seq
225 aa
AA seq
DB search
MSAAEEARGPDGLARLYRDLVDCRRCAGMQGPPVHGQAVISPVMMVGQAPGTREILQGIP
FCWTAGKTLFRWFESIGIDESTFRSRALMSAVCRCFPGKNPKGGDRVPDAAEVERCSGWW
RTEVEIARPRLIIPVGKLAITQFMASKRLNDVVGAQWPYRSPSGLEADLIPLPHPSGAST
WFKMEPGKTLLARALSLIDAHPAWQEIRMSSPVVQTSRAGRIGAT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggccgaggaggcgcgcggccccgatggcctcgcgcgcctttatcgcgatctc
gtcgactgccggcgttgcgccgggatgcaggggccacccgtgcacggtcaggccgtcatc
tcgccggtcatgatggtcggccaggccccgggcacgcgtgagatcctgcagggcattccg
ttttgctggaccgccggcaagacgctctttcgttggttcgaatccatcgggatcgacgag
tcgacctttcgcagccgtgccctcatgagtgccgtctgtcgctgctttccgggcaaaaac
ccgaaaggcggcgatcgggttcccgatgccgcagaggtggagcgatgcagcggctggtgg
cgaacggaggtcgagatcgcgcggccccgattgatcatcccggtcggcaagctcgccatc
actcagttcatggcgtccaagcgtctgaacgatgtcgtcggagcccaatggccctatcgc
tcaccgagcggtttggaggccgacctcatccctctcccgcatccatcgggagcctcgacc
tggttcaagatggagccgggcaagacgttgctcgcgagagcgttgtcgctgatcgacgcg
cacccggcctggcaggagattcggatgtcttctcctgtggtgcaaacatcccgcgccggt
cggatcggcgcaacctga
DBGET
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