Thiocapsa bogorovii: LT988_23555
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Entry
LT988_23555 CDS
T07840
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LT988_23555 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbog03019
]
LT988_23555 (orn)
03009 Ribosome biogenesis [BR:
tbog03009
]
LT988_23555 (orn)
Messenger RNA biogenesis [BR:
tbog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LT988_23555 (orn)
Ribosome biogenesis [BR:
tbog03009
]
Eukaryotic type
Pre-60S particles
RNases
LT988_23555 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UHD16186
LinkDB
All DBs
Position
5295316..5295864
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AA seq
182 aa
AA seq
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MTKNENNLIWLDLEMTGLDPATDRILEIATMITDSDLRILAEGPVVAIYQPETVLAGMDD
WNRDHHGRSGLLDRVRASTQAVSDAESTTLRFLADLVPPGASPLCGNSICQDRRFLALWM
PKLEAYCHYRNLDVSTLKILAQRWAPSVASAFKKESRHLAMDDIRESIDELKHYRMHLLR
QL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaagaacgaaaataacttgatctggctcgatctcgagatgacggggctcgaccct
gcgaccgatcgtatcctcgagatcgcgaccatgatcaccgacagcgatcttcgcatcctg
gccgagggtcccgtcgttgcgatctatcagccggagaccgttcttgcgggcatggacgat
tggaatcgcgaccatcacggccgctccggcctgctcgatcgggtgcgcgcaagcacgcag
gccgtatcggacgccgaatcgacgactctgcgcttcctcgcggatctcgtcccgcccggc
gcttcgcccctgtgcggaaacagtatctgtcaggatcgacgcttcctcgcgctctggatg
ccgaagctcgaggcctactgtcactatcgcaatctggacgtgagcacgctgaagatcctc
gcgcaacgctgggcaccctccgtggcaagcgcgttcaaaaaagagtcgcgacacctggcc
atggacgacatccgcgagtccatcgacgaactcaaacattatcgcatgcatcttttgcgc
cagctttaa
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