Thiocapsa bogorovii: LT988_24180
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Entry
LT988_24180 CDS
T07840
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00010
Glycolysis / Gluconeogenesis
tbog00020
Citrate cycle (TCA cycle)
tbog00620
Pyruvate metabolism
tbog00650
Butanoate metabolism
tbog00720
Other carbon fixation pathways
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01120
Microbial metabolism in diverse environments
tbog01200
Carbon metabolism
tbog01210
2-Oxocarboxylic acid metabolism
Module
tbog_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LT988_24180 (nifJ)
00020 Citrate cycle (TCA cycle)
LT988_24180 (nifJ)
00620 Pyruvate metabolism
LT988_24180 (nifJ)
00650 Butanoate metabolism
LT988_24180 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
LT988_24180 (nifJ)
Enzymes [BR:
tbog01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
LT988_24180 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4
Fer4_7
Fer4_10
Fer4_16
Fer4_6
Fer4_2
Fer4_9
Fer4_21
Fer4_8
Fer4_4
Fer4_17
Fer4_15
Transketolase_C
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
UHD16304
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All DBs
Position
5435398..5439006
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AA seq
1202 aa
AA seq
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MSQKLMVTLDGNEAVAYVAHLTNEVIAIYPITPSSNMGEWADEWSSLGIPNLWGTIPDVV
EMQSEAGAAGAIHGALQGGSLATTFTASQGLLLMIPNMYKIAGELSPTVFHVSARSLAAQ
GLSIFGDHSDVMACRATGYAMFCSASVQEAMDFALIAQAATLESRVPFLHFFDGFRTSHE
VTKIEQVSHETIRALIDEELVTACRARALNPDHPVIRGTSQNPDVYFQGRETVNPYYAEV
PGIVQRTMDRFAALTGRQYGLFEYVGAPDAERVILLMGSGIGAAQEAVEHLVDDGEKVGL
IKIRLYRPFDAGALLSAIPVTATRLAVLDRCKEPGADGEPLYKDVVTALAQAFADGRVAS
MPRVVGGRYGLSSKEFTPAMVKGVFDELSAPKPKNPFTVGIIDDVGHTSLAWDPDFKPAA
MAGVTACVFFGLGSDGTVSANKNSIKIISEETPNFGQGYFEYDSKKAGAVTISHLRFGPK
PINSTYLIGENEASFVACHQPTFLTRYDMLDHARPGAVFLLNSHTAPDRIWDELPRKMQQ
AIIDKGLDFYVIDAYGIAGATGMGRRINTIMQTCFFAISGILPKDEAIAHIKHAVKKTYG
KKGQSLLDRNYKAIDAALAGLHQVSVPTQVTSAFERPPVVPISAPDFVRNVTATLIAGRG
NSLPVSLMPADGTWPTGTTRYEKRNIALELPKWEEDLCTHCGKCPLVCPHAAIRAKVYPA
ALTDTAPASFQHVQIKGKDFPADHHITYQVAPDDCTGCGLCVDVCPIRDRKDPNRKALNM
VPAEQTHAAEQDNWDFFLTLPEYDRTKLDSTKIKHAMMLEPLFEFSGACVGCGETPYVKL
ATQLFGDRMLIGNATGCSSIYGGNLPTTPYTTNPQGRGPAWNNSLFEDNAEFGLGLRLAV
DKQAAHAREIIKRLAPKIGEDLAEGLLTADQSDEAGIFEQRERVLALKEKLKGLPELDAR
TLEGICDQVVKRSVWIIGGDGWAYDIGYGGVDHVLASGRNVNLLILDTEVYSNTGGQTSK
ATPMGAVAKFSAAGKPTFKKDLAMMAMAYENVYVAQVAFGAKDVQTVRAFLEAESFDGPS
VIICYSPCIAHGVDLSKNLRQQDMAVNSGHWGLFRFDPRRLATGENPLHIDSKPPSVPYR
DFVSSETRFSVLTRTHPEAAERYLQLAQKHVQTRFTLYEQLAHLAVQKAPAPAAKEPTPK
AP
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaagctcatggtaaccctcgacggcaacgaggccgtggcctacgttgcccac
ctgaccaacgaggtcatcgccatctaccccattaccccgtcctccaacatgggcgaatgg
gcagacgagtggtcgtcgctcggcattccgaatctttggggcacgatccccgatgtcgtg
gagatgcagagcgaggccggtgcggccggcgcgatccacggggcactgcagggcggctcc
ctggcgaccacctttacggcctcgcagggtctgctgctgatgatcccgaacatgtacaag
attgccggcgagctcagcccgacggtcttccatgtctcggcgcgttcgctggcggctcag
ggcctgtcgatcttcggcgaccattccgacgtcatggcctgtcgcgccaccggctatgcg
atgttctgctcggcctccgtccaagaagccatggacttcgcgctgatcgcccaggccgcg
acactggaaagccgcgtccccttcctgcacttcttcgatgggttcagaacctcgcacgag
gtcaccaagatcgagcaggtctcgcacgagacgatccgcgccctgatcgacgaggagctg
gtcacggcctgccgtgcgcgcgcactcaacccggaccaccccgtgatccgcggtacctcg
cagaacccggacgtctatttccagggacgcgaaacggtcaacccttactacgccgaggtt
cccggcatcgtgcagcgcaccatggaccgcttcgccgcactcacgggccgtcaatacggg
ctcttcgagtatgtgggcgcgcccgatgcggagcgcgttatcctgctgatgggctccggg
atcggggccgcacaggaggcggtcgagcatctcgtagacgacggggaaaaggtcggtctg
atcaagatccggctctaccgccccttcgatgcaggcgccctcctctcggccatcccggtc
accgcaacgcgactcgccgtgttggatcgctgcaaggagccgggagccgacggcgagccg
ctttataaagacgtcgtgaccgcgttggcccaagccttcgccgatggccgtgtcgccagc
atgccgcgcgtcgtcggcggccgctacggactctcgtccaaagagttcaccccggccatg
gtcaagggcgtcttcgacgagctgtccgcgcccaaacccaagaaccccttcacggtcggc
atcatcgacgacgtcggccacaccagcctggcctgggatccggacttcaagccggcggcg
atggcgggcgtcaccgcctgcgtcttcttcggcctgggctcggacggcaccgtctcggcg
aacaagaactcgatcaagatcatcagtgaagagacgcccaacttcggccagggctacttc
gagtacgactcgaagaaggccggcgcggtcaccatcagccacctgcgcttcggcccgaag
ccgatcaacagcacctatctgatcggcgagaacgaagcaagcttcgtcgcctgtcatcag
ccgaccttcctcacccgctacgacatgctcgaccatgcgcgtccgggtgccgtgttcctc
ctgaactcgcacaccgcgcccgatcggatctgggacgagctgccccgcaagatgcagcag
gcgatcatcgacaagggtctcgacttctacgtgatcgacgcctacgggatcgcaggcgcc
accggcatgggccggcgcatcaacaccatcatgcagacctgcttcttcgctatctcgggc
atcctgcccaaggacgaggcgatcgcgcacatcaagcatgcggtcaagaagacctacggt
aagaagggtcagagtcttttggatcgcaactacaaggcgatcgatgccgcactcgccggg
ctgcatcaggtcagcgtcccgacgcaggtgaccagtgccttcgagcgcccgcccgtggtg
ccgatctcggcacccgacttcgtgcgcaacgtgaccgcgaccctgatcgccggaagaggg
aacagtctcccggtcagcctgatgccggccgacggcacctggccgaccggcaccacgcgc
tacgagaaacggaacatcgcgctcgagctgccgaaatgggaagaggacctctgcacccat
tgcggcaaatgcccgctggtctgcccccatgccgccatccgcgccaaggtctacccggcc
gcactcacggacaccgcaccggcgagctttcagcatgtccagatcaagggcaaggacttc
cctgccgatcatcacatcacctaccaggtcgccccggacgattgcaccggctgcggtctc
tgcgtggatgtctgcccgatccgcgaccgcaaggatcccaaccgcaaggcgctgaacatg
gtcccggccgagcagacgcatgccgccgagcaggacaattgggatttcttcctgacccta
ccggaatacgatcgcactaagctcgacagcaccaagatcaagcacgccatgatgctcgag
ccgctcttcgagttctccggcgcctgcgtgggctgcggcgagaccccgtacgtcaagctc
gccacccagttgttcggcgaccgcatgttgatcggcaacgccaccggttgctcctcgatc
tacggcggcaacctccccacgacgccctacaccaccaacccccagggtcgcgggcctgct
tggaacaactcgctgttcgaagacaacgccgagttcggtctcggtttgcggctcgcagtc
gataagcaggccgcccatgctcgcgagatcatcaagaggctcgcacccaagatcggcgag
gatctcgccgaaggcctgctcacggccgatcagtccgacgaggccggcatcttcgagcag
cgcgagcgcgtgctcgccttgaaggagaagctcaaaggcctccccgagctggacgcccgc
accctggaaggcatctgcgatcaggtcgtcaaacgcagcgtctggatcatcggcggcgac
ggctgggcctacgacatcggctacggcggcgtggatcatgtcctcgccagcgggcgcaat
gtgaacctcttgatcctggataccgaggtctactcaaacaccggcggccagacttccaag
gcgaccccgatgggcgcggtcgccaagttctccgcagccggcaaaccgaccttcaagaag
gatctcgccatgatggcgatggcctacgagaacgtctatgtggcccaggtcgccttcggc
gccaaggacgtccaaacggtccgcgccttcctcgaggccgagtcattcgacggtccttcg
gtcatcatctgctactcgccctgcatcgcgcacggcgtggacctctcgaagaacctgcgt
caacaggacatggcggtcaactcagggcattgggggctgttcaggttcgacccgcgtcgg
ctcgcgaccggcgagaacccgttgcacatcgacagcaagccgcccagcgtcccctatcgc
gacttcgtgtcctccgagacccgcttcagcgtcctcacccgcacccatccggaggccgcc
gagcgttatctacagctcgcccaaaagcacgtccagacgcgctttacgctctacgagcag
ttggcgcacctggccgtgcagaaggcacccgcgccggctgcaaaagagccgacaccgaaa
gcgccttaa
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