Trypanosoma brucei brucei: Tb09.160.2970
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Entry
Tb09.160.2970 CDS
T01013
Name
(RefSeq) mitochondrial RNA editing ligase 1
KO
K01973
RNA-editing ligase [EC:
6.5.1.3
]
Organism
tbr
Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Tb09.160.2970
Enzymes [BR:
tbr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.3 RNA ligase (ATP)
Tb09.160.2970
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GFIT
Motif
Pfam:
RNA_ligase
T4_Rnl2_C
DUF4799
Motif
Other DBs
NCBI-GeneID:
3660066
NCBI-ProteinID:
XP_803740
UniProt:
P86927
Structure
PDB
PDBj
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All DBs
Position
9:766770..768179
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AA seq
469 aa
AA seq
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MQLQRLGAPLLKRLVGGCIRQSTAPIMPCVVVSGSGGFLTPVRTYMPLPNDQSDFSPYIE
IDLPSESRIQSLHKSGLAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIMDPNEN
FFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRLVLNGELFGAKYKHPLVPKSEKWCTLP
NGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEFSSKVPNL
LYARALVRGTLDECLAFDVENFMTPLPALLGLGNYPLEGNLAEGVVIRHVRRGDPAVEKH
NVSTIIKLRCSSFMELKHPGKQKELKETFIDTVRSGALRRVRGNVTVISDSMLPQVEAAA
NDLLLNNVSDGRLSNVLSKIGREPLLSGEVSQVDVALMLAKDALKDFLKEVDSLVLNTTL
AFRKLLITNVYFESKRLVEQKWKELMQEEAAAQSEAIPPLSPAAPTKGE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccaaaggttgggtgctccactacttaaaaggcttgtggggggatgcatacgc
caatcaacggcgccgattatgccatgtgttgttgttagtggctcgggtggttttttgact
cccgtgcgtacttacatgccgctccccaatgatcaaagtgacttctcaccgtacatcgag
attgatttgccaagtgaaagccgcatccaatcactgcataagagcggacttgcggcacag
gagtgggttgcatgtgaaaaagtgcatgggacaaactttggtatctacttaattaaccag
ggagaccacgaggttgtgaggtttgcaaagcgtagtggcatcatggacccaaatgagaat
ttctttggttaccacatccttatcgacgagttcacagcacaaattcgtattctaaatgac
ctattgaaacaaaaatatggactgagccgtgttgggcgtttggtgctcaatggagaactg
tttggtgccaagtataagcacccactcgttccaaagagtgagaagtggtgcacgctacca
aacgggaagaagttccctatcgccggtgttcaaatacagagggaaccctttccacaatat
agtccagagctccatttctttgcatttgacattaagtacagtgtgagtggcgcggaagag
gacttcgtgctgcttggttacgacgagttcgtcgagttttcttccaaagtgcccaacctg
ttatacgcgcgggctcttgttcgtgggacgttggatgagtgtttagcatttgatgtggag
aatttcatgacaccgctgcccgcgttgcttggcttaggtaattacccccttgaggggaat
ttggcagagggtgtggtcattcgtcacgtacgtcgcggggatccggcggtagagaaacac
aacgtctcgactataatcaaactccgctgctccagtttcatggagttgaagcaccccggt
aagcagaaggaactgaaggagacatttatcgacacggtacgctccggagctctgcggcgg
gtgcgagggaatgtgaccgttatctcagactccatgttgcctcaggtggaggcagcggcc
aatgatctgttactaaacaatgtaagcgatggcaggttgagcaatgtgctatcgaagatt
ggtcgtgaacctctgctgtctggggaggtatcgcaggttgatgtggcgcttatgcttgct
aaggacgcactgaaagactttctcaaggaggtagatagtttggtgttgaacacaaccctt
gcttttcgcaagttgctaatcaccaatgtctacttcgagtctaagcggttagtggagcaa
aagtggaaggaactcatgcaggaagaagcagccgcgcagtcagaggctattccaccactt
tcacccgctgcccccacaaagggcgaatga
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