Trypanosoma brucei brucei: Tb09.160.3780
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Entry
Tb09.160.3780 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04120
Ubiquitin mediated proteolysis
tbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tb09.160.3780
04120 Ubiquitin mediated proteolysis
Tb09.160.3780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbr04121
]
Tb09.160.3780
Enzymes [BR:
tbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Tb09.160.3780
Ubiquitin system [BR:
tbr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Tb09.160.3780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-RING_5
FANCL_C
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
3660541
NCBI-ProteinID:
XP_803834
UniProt:
Q38F27
LinkDB
All DBs
Position
9:874583..876049
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AA seq
488 aa
AA seq
DB search
MLSLYAYIFLSLVVTIGFVVDYATVYTDFFSLVVALTDSPIFRLLCVNSFIALSWVLWLV
ARFTFFGTLSRTESDAVRSVTPVYAMEFIVCPLYFGISTLSSAGVVSLVTVVVAVLHRLA
QERVSTLQVMEDRVLRTPMLVRLLIFLYLFSMIDLYVVFDMIGNTAESYGDQLSMQYCIA
LLYVQFLISILKSFTQLFFTVATKESTYNSLAFYMEMFFSLSNNVVFFISFLYICTSSYV
PFPLMRMFLQNMIMCGKNVRLVARYRKLTALLREIPNATEEILSRDPHCAICYDDMSPDQ
TCKQLPCGHCYHEACLLHWFEKMSTCPYCRSDIAQRTSAMAAYAKRVRVPADATTTPSEQ
TGSDASATPSPEDDTTSMPMPSEEEMRRSYERYLAEMASRQRAQGAAISAEADASRLGEE
VSAASTDRFSVVEEINKSLTQSNAVRSVDVPAVSTKEAQRLAAYEEHAAAVRAAQEKLQQ
RLKSIDAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctttccctatatgcgtacattttcctaagtttggtggtgactataggcttcgtcgtc
gactatgccaccgtttacactgatttcttttcgttagttgttgcgctgacagactccccc
atattccgcctcttgtgcgtgaacagcttcatagcgttatcatgggtcctttggcttgtt
gcccgcttcaccttctttggcacgttgagccgcaccgaaagcgacgcggtgcggagtgtt
acgcctgtgtatgctatggaatttattgtttgccccctttatttcggtatctccacactg
agttccgcaggtgtggtttcacttgttactgtggttgttgcggttctccatcgccttgca
caggagcgcgtatcaacacttcaagtgatggaggatcgggtgttacgtacacctatgctt
gtccggctgctgattttcctgtaccttttctccatgatcgacctctatgttgtgtttgat
atgattgggaatacggcagagagctatggagatcaactgtctatgcagtattgcatagcc
ttattgtatgtacagttccttatatccattctcaagtcgtttacgcaactcttcttcacc
gtggccaccaaggagtcgacgtacaacagcctggccttctatatggagatgtttttttcc
ctctccaacaatgtggtgttcttcatttcatttctgtacatttgtacttcatcgtacgtt
ccctttccgcttatgcgcatgtttttacaaaacatgataatgtgcgggaagaacgttcgc
ctcgtcgcgcgatacaggaaacttacggctcttttgagagaaataccaaacgccaccgaa
gagattttgtcccgtgacccgcactgtgctatatgttacgatgatatgtcgcctgatcaa
acatgcaagcaactcccatgtgggcactgttatcatgaggcgtgcttgctccactggttt
gaaaaaatgtcaacgtgcccctactgcagaagcgacatcgctcagcgaaccagtgctatg
gcagcgtatgcgaaaagggttcgggttccggcggatgccaccactacaccatcggagcag
acgggatctgatgcgtcagcaactccgtcccccgaggacgatacgacaagcatgccaatg
cctagcgaggaggaaatgcggaggtcatatgagcggtacctagcagaaatggcttcgcgg
cagcgggcgcagggggccgccatctcagctgaagccgatgcttcgcgcttgggggaggag
gtttctgcagcatcaaccgatcgcttctcagtggttgaggagataaacaaaagtctcact
cagagtaacgctgtcaggtcagtggatgtcccagcagtgagtacgaaggaggcgcaacgt
ctagcagcttacgaggagcacgctgcggctgtaagggccgcgcaagagaaactacagcaa
cgtctgaaatccattgatgcctcctag
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