Trypanosoma brucei brucei: Tb09.211.4210
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Entry
Tb09.211.4210 CDS
T01013
Name
(RefSeq) ubiquitin-protein ligase, putative
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tb09.211.4210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbr04121
]
Tb09.211.4210
Enzymes [BR:
tbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
Tb09.211.4210
Ubiquitin system [BR:
tbr04121
]
Ubiquitin ligases (E3)
HECT type E3
Tb09.211.4210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
C1_2
WAPL
Motif
Other DBs
NCBI-GeneID:
3661071
NCBI-ProteinID:
XP_827562
UniProt:
Q38D88
LinkDB
All DBs
Position
9:complement(2060526..2066264)
Genome browser
AA seq
1912 aa
AA seq
DB search
MSRQLVVDSKQQIKAVQHLSKDPERVVGALEDMCMSLVMGVEVYLRGFDSMRVVPTLVHM
AESERFFRAGDALTMIFRALSLIMEHVPTSYCGVHPYHKRLVRIATEVLARVHSREMRFS
NLDRVMLMEEVLRLIRFVTLDESSVSLVHLGLRDVTKTAQYENALLTRQALDVLLAVCSK
VVLPSETRKRKFFSSVVSLFSCCKSLKDEQQENKPCVKPSVVTTDHILVPFLQGMIQQYA
SSLESSPDSWSLLELALQCLGMLIRRAVLFNRLSSAQRMITSELCRCLYRLLLLNDGNVA
LDPSVRSERLLFSETMIDIILTADWVNVSDMLLSKEARAFYGIVLDDSDPSITMLLSDPF
PVGGISRAAHRRDKNHIVSIAAIRHFILASPPLPSEAFGPKPKVVLPVHKWMWEDEMRHN
SPIPEEACVTLETCLARRTKEVTLRIHSKILTANLATMKICSGFGGAELNISRKFVPFVF
HVMNEADIRSVKAAKDVTGVVEYIANSAEENIGVPISSGMDKLVNRRESELCRYYVLNNS
APVPAASMKIAEMYLESLCKYATWASGSMAMQLGVCACAALLQAAILAKKPQQLTELLRK
TMRPLCDMLRTALISADKATKSVALTMMVWLLRHPGSSEWKAAETAYRCGVVKQLENLAN
SKCKRLDDRQADDQDGKIRRMVPKVKLEGPENRTMHLMAMVRAILSTVEKEMSENSVPPS
ARSHVGCVTALWESVQELRKQTMVFGTHQKVVAQVLRVMEKTSGNITAFEISKMGIADAV
LGYLLMSNTGGDEYDTNEEIGATCAAESSGALISEGVVPGLTVDTGTDPATFGGVRIADQ
LKRLCQKDRLKCFLQLMAEYPRGVEALIENLVSALCLISNLPFVESLMTSQRVTCVPLTK
AMSAVSQLSQDVSLCRKTVYPSSSGNPCRRGVSHDRGRNQPCSSLKSGDIPSSTPSQRAV
SQRGSKLTVRESCPNGHLLLSLEMIAPKRSCESCEEQLETGFGCNVCNYFLCVSCHSHFI
TSRDGGATGRRSSSFNGVAAGAPDTVVQPKSRVNVATSAHLFSSIGDIERTFRTDSNSTK
GTEVAPCPQSTLAAEVFLERVQLVLSRKKETMSYVELRQELQRLIDGFIAQRETIESLDE
LDAHNKKTPVDLEEPSRLERMLHDAMEDRYVLYTSPTGRCAYQETLMGNIMQRALNLGLV
DVVGQLESCLVTPESHGEPLNLGGGEKGLSKTLLLLRGDIVNGEVPPSATEDKEHITSWQ
LNRFHHFESDAHTHCCCGLRSREELNTAYPSKLVRKPSHLSQSPDVLLLILLHKILQPLM
VANTIPINPDVFVSAILTTQLVKSVAASALRIALLPPRIAVPRWVDFILTEAKFLVPPSV
REDVVRFLAYGARRALHANIRSSMGSRRYRMYKVYPSEWSKYENHKYVVSRNDLLHGAYM
VLRKGAECRAPISIQFKGEVGIGQGPTAHFYTLIARELTKCRLRLWNNSSRSSTTHESGD
SCGNRQLRSKSNSGTFDDEQRVESRPEGLFPCSSVPKVLQRFSTDLSLSSCRDTKALTER
FLCMNDFFEVDEERAQLYYLVGTVLGRAFTDAVVFPLDISPALALFLCRGIPPSRIVLRC
TEKEEQPWEPERPIDFMSLGIEEVEMMDKQVASSLRSLLSMSSKELSSLDLPFTMPGDDR
FEMIDKGQSTCVNSTNVSAYIRRAASALLYESVVMPIRFITYGFRDVVPCEALAALDASE
AMSLLCGNRIRDSEPLWTAAEIKSIIVPDHGYNSESPQITMLQNILAKRFGPREQRAFLL
FCTGCPRLPHGGISALGAITVVQSTHMPTLPDASHTEGNGKDGSNGGRKGGDRSRRISRT
GNGTKAVGIDWPLPSVNTCFRYLKMPPYPTEELMYNKLQLSIMYAGDTFELS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacagctagtggtggactccaagcagcaaattaaggcggttcaacatctgagc
aaagaccctgagagagtggttggtgcactggaggatatgtgcatgtctctcgtaatgggt
gtagaggtttatttacgtggatttgattcaatgagggtggtaccgactttagtacacatg
gcggagagtgagcgcttttttagggctggcgatgccttgacgatgatctttcgcgcactt
tcactcataatggaacatgtccccacttcgtattgtggagtgcatccataccacaagcgc
cttgtacgtatagcaacggaagttcttgcacgtgttcatagtcgggagatgcgcttcagc
aacttggatcgcgtcatgctgatggaggaggtcctccggcttattcggttcgtcacgctg
gatgaaagtagcgtttccttagtacaccttggcttaagagatgtcaccaagactgcacag
tatgagaacgccctacttacgcgacaggctctcgacgttcttttagccgtttgctccaag
gttgtactaccgtcagaaacgaggaagaggaaattcttcagcagtgtagtatccttattc
tcctgctgcaagtcccttaaagatgaacaacaggaaaataaaccttgcgtcaagccatct
gtagtaactacggaccacattcttgtgccgttcttgcaaggtatgattcagcagtatgcg
tcaagtcttgaatcatcgccagactcatggtcgttgttggagttggcattgcagtgtctc
ggcatgctcatacgacgggctgtgctcttcaaccgcctttcatctgcgcagagaatgata
acatcggagctctgccgatgtctttaccgacttcttttgttaaatgatggtaacgtcgca
cttgacccttccgtgcgctctgagcgtcttctcttctcggaaacgatgatagacattatc
cttacggcagattgggttaatgtgagtgatatgcttctttccaaggaagcgcgggctttt
tatggaattgtactcgatgactcagacccgagcattacaatgcttctgtccgaccctttt
cctgttggtggcatatcacgggccgcacatcggcgcgataaaaatcatattgtttccatt
gctgccatacgtcactttattttggcatcccccccacttcccagtgaggcttttgggcca
aagcccaaagtagttcttcctgtgcacaaatggatgtgggaagatgaaatgcggcataac
agtcccataccggaggaggcttgtgtgacgctggaaacttgcttggctcgtcgtacaaaa
gaggtgacgcttaggatacactcaaagatactaactgcgaatcttgcaacaatgaagatc
tgcagcggatttggaggtgctgagctcaatatttcacgcaaattcgtcccctttgtcttt
catgtgatgaatgaagcagatatacgatctgtgaaagcagcgaaggatgtcacgggtgtt
gttgaatacatagcaaactctgcagaagaaaatataggagtgccaatttcttctggtatg
gacaaactagtaaacaggcgtgagtcggagttgtgtcgttactatgttctcaacaacagc
gcgccagttccagccgcatccatgaagatcgcggagatgtatcttgagagtctatgcaaa
tatgcaacctgggcgtcgggatcaatggctatgcaactgggcgtgtgtgcctgcgcggct
ctgcttcaggcagcgatattggccaagaaaccccagcaacttacggaactgttgcgcaag
acaatgcgtccgttgtgtgacatgcttcgcaccgcactcatttcggctgacaaggcaacg
aaatccgtggctctcacgatgatggtgtggcttcttcgccacccagggtcatcagagtgg
aaagcggcagagacggcttatagatgcggcgtagtgaagcagttggaaaatttggccaat
tcgaaatgcaaaaggctggatgatcgacaggcagatgatcaagatggtaaaattcgtcgg
atggtaccaaaagtcaagctggagggacccgagaaccgaacgatgcacttaatggcgatg
gttcgtgcgatactgtcaactgtggagaaagagatgagtgaaaactcagttcccccttcg
gcccggtctcatgtaggttgtgttacagccctttgggagtcagtgcaagaactgagaaag
caaactatggtatttggaacgcaccagaaggtagtggcacaagtactgagggttatggag
aaaacgtcgggaaatataacagcatttgagatatctaaaatgggtattgcggatgcggtg
ttgggctatctattaatgtcgaacactggaggagacgagtatgatacaaatgaggagata
ggggcgacttgcgctgctgaatcttccggtgcgttgataagtgagggagttgtcccgggc
cttacggttgacacaggaaccgacccagcaacttttgggggtgtgcgtatcgctgatcaa
cttaaacggctctgccagaaagatcgtctcaaatgtttcttacaattaatggccgagtat
ccacgtggtgtggaggcgttaatcgaaaatttagtttctgccctttgtcttatcagcaac
ttgccctttgttgaatcgctgatgacatcgcagcgtgtgacttgtgtgccgctgaccaaa
gccatgagtgcagtttcgcagctatcgcaggatgtatctctgtgtcgcaagacagtttac
ccatccagttcgggaaatccttgccgccgtggtgttagccacgatcggggaaggaatcaa
ccctgcagcagcctcaaatccggggatattcctagttccacgccctcccaacgtgcagtg
tcgcagcgcggttcgaaactaacggtacgtgagtcttgtccaaatggccatttgttgctt
tcactggagatgatcgcaccgaaacgttcctgcgagtcatgtgaagagcaactggagacg
gggttcggttgtaatgtgtgtaactattttctctgtgttagttgccatagccattttatc
acttcgcgtgatggcggtgctacgggtcgtcgctcctcatcttttaatggtgttgcagcg
ggggcccctgacacagtagtacagccaaagtcacgtgtgaacgttgctactagtgcacat
ttgttttctagcattggggatattgagcggacattccgcacagactctaactccaccaag
ggtaccgaagttgctccttgtccgcaatcgactctcgctgctgaggtgtttctggaacga
gtgcaactggttttgtcgcgaaaaaaggaaacgatgagttatgttgagctccggcaggag
ttgcagcgactgattgacggcttcatcgcgcagcgggagacgatcgaatctctagacgaa
cttgatgcccacaacaaaaaaacgcctgtggacctggaggaaccaagcaggttggagcgt
atgttgcacgatgccatggaagatcggtatgttttgtatacgtcacccacgggacgttgt
gcttatcaggaaactctcatgggaaacataatgcagcgggcgttgaatttgggtctagtg
gatgttgtgggtcagctggagagctgtcttgtgaccccagagagtcacggagaacctttg
aacttgggtggtggagaaaagggcttatccaaaacactccttctgttgcgtggggacatt
gtgaatggagaagtaccgccgtcagcaactgaggacaaggagcatataacgagctggcag
ctgaaccgatttcatcattttgaaagcgacgctcacacacactgctgttgtggcctgcgg
tcgagggaagagctgaacactgcctacccgtcgaaattggtgcgtaagccgtcacatctt
tcgcagagtccggatgttcttcttctcatccttcttcacaaaatacttcaaccattaatg
gtggcgaatacgatccctatcaaccccgacgtttttgtaagcgccattctgacaactcag
cttgttaaatccgtagcggcatcggcgcttcgtatagcgcttctgccaccacgtatcgct
gttccacgctgggttgacttcattttgacggaggcaaagtttcttgttcccccatccgtt
cgggaggatgtcgtacgttttcttgcgtatggtgctcgccgcgcgcttcatgcgaatata
agaagctcaatggggagtcggaggtatcgtatgtacaaggtgtatccgtcagagtggtcc
aagtatgaaaaccacaagtatgttgtcagtcgcaatgatttgcttcatggagcctacatg
gttctcagaaaaggggcggaatgccgtgcgcctatatcgattcagttcaagggtgaggtc
gggataggccagggaccgacggcacacttctacaccctcattgcaagggagctcaccaag
tgtcggctgcggctatggaataactcttcacgctcgtcaacaacgcatgaaagtggtgac
agttgtggaaaccgccaattaaggtcgaagagtaacagcgggacatttgacgatgagcag
agggtggagtcccgccctgagggactttttccgtgtagctccgtccccaaagtactccaa
cgtttttcaacagatctatcgctgtcttcctgtcgtgacactaaagcgttgacggaaagg
tttctctgtatgaatgattttttcgaggtggatgaagagcgcgcccagttgtattatctc
gttggcaccgtactgggtcgggcattcaccgatgcagttgtctttcctttggatatcagt
cctgcattggcgctgtttctttgccgtggaattccaccatcacgtatagtgcttcgctgc
acggaaaaggaggagcagccgtgggagccggagcgacccatcgacttcatgtcacttggc
atcgaagaagtggagatgatggataagcaagtggcttccagcttacgttcattgctttca
atgagttcgaaagagttgtcatcccttgatttacccttcacaatgcccggtgacgataga
ttcgagatgatagacaagggacagagcacatgcgtaaactcgacgaatgtatccgcttac
attagacgagctgccagcgctctcttgtatgagtcagtcgttatgcccatccgcttcatt
acatatggtttccgtgatgtggtcccttgcgaggcgctagcagcacttgatgccagcgag
gcgatgtcgttgttgtgtggcaatcgcatcagggattccgaacccctctggacagctgca
gagatcaaatccatcatcgtccccgatcatggttataacagcgagtccccacagataaca
atgctgcagaatattctcgcgaagcgctttggcccccgtgagcaacgagcatttcttctc
ttctgtacgggctgcccgcgccttccgcatggcggcatcagtgcacttggtgccattaca
gttgtgcaaagtacccatatgccgacattacctgatgcctcccatacggaaggcaatggc
aaagacggttctaacggcgggcgaaaaggcggtgatcggtcacggcggatctcacggacg
ggcaacggaactaaagctgtgggaatagattggccccttccatccgtcaatacgtgtttc
cgctatttgaagatgccaccgtacccaacagaagaactaatgtataataaacttcaactc
agcatcatgtacgcaggggatacattcgagctgtcgtag
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integrated database retrieval system
