KEGG   Trypanosoma brucei brucei: Tb09.211.4290
Entry
Tb09.211.4290     CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K15171  transcription elongation factor SPT4
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Tb09.211.4290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb09.211.4290
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb09.211.4290
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Tb09.211.4290
  RNA polymerase I system
     Tb09.211.4290
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Tb09.211.4290
SSDB
Motif
Pfam: Spt4 BSP_II
Other DBs
NCBI-GeneID: 3661078
NCBI-ProteinID: XP_827569
UniProt: Q38D81
LinkDB
Position
9:complement(2082591..2083406)
AA seq 271 aa
MDIFPLFLPAVICCDAINESLPVASPSKPGYLHDVSTALRQRHAVPHQFPFFLCFFALNY
LFLFVRIATVSSLLDLRGKGGGTISGRVEEEVKTYLGINGNTYTNTKRCACACPCVWTPM
SGDSEPPPQLPVGDHGYLACRRCRLIITEQQFLHEGCQVCGTGPVSREELLDVATAEFSN
FIGLIAPEKSWVGRLINRTNCPNGVFATELCDEDESGEEEEEVEENDVYDEDEDGDSGND
VDNTNGDGMPGGDKLGPVMTDEELLLAMSGA
NT seq 816 nt   +upstreamnt  +downstreamnt
atggatatttttcctctttttcttccggccgttatttgttgtgatgccataaatgaatct
ttgcccgttgcttcaccgtctaaacccggttatttacatgatgttagcactgctctgcgt
caacggcacgccgtgccgcaccagttccccttttttctttgcttcttcgctttgaactat
ttatttctgtttgttcggattgcaactgttagtagtcttttggatttgagaggaaagggg
ggggggacaatcagcggcagagtggaagaagaggtaaaaacatatttaggcatcaacggc
aacacctacactaacactaaaaggtgtgcttgtgcgtgtccgtgtgtgtggactccaatg
agtggtgacagcgagccaccgccacagcttccggttggagaccatggttacctcgcctgc
cgccggtgccgcttaattatcacagagcagcagtttcttcatgagggctgtcaggtatgc
gggacggggccggtcagtcgtgaggagcttttggatgtcgccacggcggagttctcgaat
tttataggtctcattgcgccggagaagtcgtgggttggtcggctaatcaaccgaacaaac
tgcccgaacggagtgtttgccactgagttgtgcgatgaagacgaaagcggtgaggaggag
gaggaggttgaagaaaacgacgtatatgatgaggatgaggatggtgacagtggaaatgat
gttgacaatactaatggtgatgggatgcctggcggggataaactaggaccagtcatgacg
gacgaggaactgctgttggcgatgagtggtgcatga

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