KEGG   Trypanosoma brucei brucei: Tb10.6k15.2130
Entry
Tb10.6k15.2130    CDS       T01013                                 
Name
(RefSeq) ribonuclease, putative
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tb10.6k15.2130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb10.6k15.2130
Enzymes [BR:tbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     Tb10.6k15.2130
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     Tb10.6k15.2130
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 3662359
NCBI-ProteinID: XP_823070
UniProt: Q38AC8
LinkDB
Position
10:2043955..2045484
AA seq 509 aa
MDVDKYNCSVVFDDFKVSIEQCDFYALDQEMTGVDNGERPQSGTMSLTELYQVSRDVVNR
YIAFQLGVTVFKRVDGGYEVKPYNFYLLKSVGDFVVNIESLKFLADNHMDFQRWLVTGMP
YCGKVDTGLRGDEGGSVSSLRRGLSEYLVSRIKKWYNSPLARDGECITFKTVICEEIERL
TLSKLKEEQVFVSFEYDKSRCIGSPVSLTVHRGTSHFASGQGKEKATPDLEPIKVCGFQH
FWKCLTDCKKPIVGHNFWLDIMFMVQMHEGPLPEDYDTYKRLVHQLFPCVYDTKTLGREV
IINNLSESFCLKDLYDRCLASRLKLGGAPEFFFPPGFGRYDPDSLESECKAHEAGYDSYM
TGVAFSICRDLYCSGENSTLDKWRNIVSVYGSNYYMNVNGKDSLRRSATFVVEFREEIEY
PFGELLLCRDDAFTNVDRDVELLPRDCIISYDNKGLCRTIIVVFEDDISEDEVQTRIANS
ARRWSEVTKEANAYNIVFPEILSVYRLSG
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggacgtcgacaaatataactgttccgttgtttttgatgattttaaggtttccatcgag
caatgtgatttttatgcgcttgatcaggagatgaccggtgtcgataacggtgagcgaccg
cagtcaggaacaatgagtttgacagagctttaccaagtttcgcgggacgttgtcaaccgg
tacattgccttccagctaggtgtaacagttttcaagcgtgttgatggcggatatgaggtt
aaaccatacaacttttatttattgaaaagtgtgggcgattttgttgtgaatattgagtca
ctgaagttcttggcagacaaccacatggattttcagcggtggttggtgacaggcatgccg
tattgtggtaaagtggacacagggttgcgtggtgatgaaggaggttctgtgtctagttta
aggagagggttgtccgaataccttgttagtcgaataaaaaagtggtataacagcccgttg
gcacgggatggcgagtgtattactttcaaaactgtaatatgcgaagaaatagagcggttg
actttatcaaagcttaaagaagaacaagttttcgtttcatttgagtatgataagtcgaga
tgcattggatcaccggtgtcgttgacagttcaccgtggaacgagtcatttcgccagcggc
caaggtaaggaaaaggccacacctgatttagagccgatcaaagtatgtgggtttcaacat
ttttggaagtgcttaaccgattgcaagaaacctattgttggccacaatttttggcttgac
attatgtttatggttcaaatgcacgaagggcctctccccgaagattatgatacttacaag
agactcgttcaccaactgttcccgtgcgtatacgatacgaaaacactcggccgcgaggtg
ataattaacaacttatctgagtctttttgtctgaaagatttgtacgacagatgcctggcc
tcgaggctaaaattgggaggggcaccagagttctttttcccaccaggatttggtcggtac
gacccagacagccttgaaagtgaatgcaaagcccatgaagctgggtacgattcatacatg
acgggcgtggctttttccatttgtagggatttgtactgtagcggtgaaaattctaccttg
gataagtggcgaaacattgtttctgtctacggcagcaattactatatgaatgtcaatggc
aaggatagtttgaggaggtctgcaacgtttgtggtggagtttagggaggagattgagtat
ccttttggagagttgcttctgtgtcgggacgatgcattcacaaatgtggatagggacgtg
gagttattaccgagggactgtattatatcatatgacaacaaaggattatgcaggacgata
atagttgtgttcgaagatgatattagcgaagacgaggtacaaacgcgcattgcgaattcg
gcgcgccgttggagtgaggttactaaggaggcaaatgcttataatatagtatttcccgaa
atactaagtgtttaccgtcttagtgggtag

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