| Entry |
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| Name |
(RefSeq) valosin-containing protein homolog
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
tbr Trypanosoma brucei brucei
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| Pathway |
| tbr04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:tbr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tb10.70.1190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tbr03019]
Tb10.70.1190
03009 Ribosome biogenesis [BR:tbr03009]
Tb10.70.1190
04131 Membrane trafficking [BR:tbr04131]
Tb10.70.1190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:tbr04147]
Tb10.70.1190
Messenger RNA biogenesis [BR:tbr03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tb10.70.1190
Ribosome biogenesis [BR:tbr03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tb10.70.1190
Membrane trafficking [BR:tbr04131]
SNARE
SNARE associated proteins
Others
Tb10.70.1190
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Tb10.70.1190
Exosome [BR:tbr04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tb10.70.1190
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(1429902..1432244)
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| AA seq |
780 aa
MSAKAQQVKQQKLNRLIADDLAEDDNSVVVLNAKRMDELSIFRGDTVKLKGKKNRSTICI
AMSDENCPEGSIMVNKVTRRNIRILLGDLITVSSHSNVPYGNHVHVLPIDDTVKNLTGDL
FETFLKPYFLEAYRPVKTGDLFICRGAMRSVEFKVVEVDPGDCCIVAPETVVHCEGDPIR
REDEERLDDVGYDDIGGCRRQLVQIREMVELPIRHPELFKSIGIKPPRGILMYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESEGNLRNAFVESEKNAPAIIFIDEIDSIAP
KREKAQGEVEKRIVSQLLTLMDGLKGRSQVIVMAATNRPNAIDPALRRFGRFDREIDIGV
PDEIGRLEILRIHTKNMKLHPNVDVEKIAKDSHGYVGADLAQLCTEAAMQCVREKMAVVD
WDDETIDAEVLDSMSVTNNHFLDALSKMNPSALRETQVETPNVTWSDVGGLLDVKRELQE
LVQYPVEFPWKFEKYGISAPKGVLFYGPPGCGKTLLAKAIATECQANFISIKGPELLTMW
FGESEANVRDVFDKARAAAPCVLFFDELDSVARSRGHSGDGGASDRVINQILTEMDGMNS
KKNVFIIGATNRPDVLDPAVMRPGRLDQLIYIPLPDKASRVAILKASFRKSPLAPDVDLD
QLAAATHGFSGADLAGICQRACKLAIRESIAKEIQLEEARANGVLNEDQDIDPVPQITRL
HVEEAMRGARRSVSDADIRKYELFATSLQQSRAFGNVSLDPGNQGGAGGDAGAGDDDLYS |
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| NT seq |
2343 nt +upstreamnt +downstreamnt
atgtcagctaaggcgcaacaagtgaagcagcagaaattgaacagattgattgcggatgac
cttgccgaagacgacaacagcgtggtggtgctcaacgcgaagcgcatggacgaactgagc
atattccgtggagacacagtgaagctgaaagggaaaaaaaaccgctccacaatttgcatt
gctatgagtgatgaaaactgccctgaagggtcgatcatggtgaacaaagttacacggcga
aacatccgtattctccttggagatctaattaccgtcagcagccacagcaatgtgccgtat
gggaatcatgttcacgttcttcctattgacgacaccgtaaagaacctaacaggcgacctg
ttcgaaacattcctcaaaccatattttctggaggcctatcgacccgtgaaaacaggagat
ttattcatttgccgtggggcgatgcgctcggtagagtttaaggtggtagaggtggaccct
ggggactgctgtatagttgctcctgaaacggtggttcattgtgaaggcgaccccatccgc
cgcgaggatgaggagcggttggatgatgtgggctacgatgacattggcggctgccgcagg
cagctggtgcaaatccgtgaaatggttgaacttcccattcgccaccccgagcttttcaag
agcattggcataaaaccccctcgtggtattctcatgtacggccccccaggaagcggcaaa
actcttattgctcgggctgtcgctaacgaaaccggtgcgttcttctttttgatcaacggg
ccggagattatgagcaagatggccggcgagtcggagggtaacctgcgcaacgcattcgtg
gagtcagagaagaatgcccctgcaattatttttattgacgaaatagactcaatcgccccg
aagcgcgaaaaagcgcaaggcgaagtggaaaaacgtatcgtctcgcaacttctgacgctc
atggacgggctgaaagggcggtcgcaggttattgttatggcagcaaccaatcggccaaat
gcaatcgaccctgcgcttcgccgttttggtcgcttcgaccgggagatcgacattggtgtt
cccgatgaaattgggcgtctcgagatcctccgcatccacacaaaaaatatgaagcttcat
ccaaatgtagacgtggaaaagattgctaaggacagtcatggatacgttggtgctgatttg
gcgcaactctgcactgaggcagcaatgcagtgtgtccgtgaaaagatggccgttgtggac
tgggacgatgaaacaattgatgccgaagttttggattccatgtctgtaacaaataatcat
ttcttggatgcactaagcaaaatgaatccctctgctcttcgtgagacgcaagtggagact
cccaacgtcacgtggagcgatgtcggtggtcttttggatgtgaagagggagttgcaggag
cttgttcagtatccagtagagttcccgtggaaattcgagaagtatggaatctccgccccg
aagggtgtgcttttttatggaccaccaggttgcggtaaaacactgctagcgaaggctatc
gctacggaatgtcaggcaaacttcatctccatcaaggggccggaactgctaacgatgtgg
tttggtgaatctgaggctaatgtaagagacgtgtttgacaaggcaagggctgctgctccg
tgtgtgctcttcttcgatgaactggattccgtggcgcggtcccgcggtcacagtggtgat
gggggggcaagcgaccgtgtcatcaaccagatccttactgaaatggacggtatgaacagt
aagaagaatgtgtttattattggagcaaccaaccgcccggatgtgttggaccctgcggta
atgcgcccaggccgccttgatcagctcatttatattccactgcccgacaaggcgtcgcgt
gtggcaatccttaaagccagtttccgcaaatcgcccttggcgcctgatgttgatttggac
cagttggctgccgccacgcacgggttttccggtgcggatctggctggtatttgtcagcgg
gcatgcaaactagccattagggagtccattgcaaaggaaattcaacttgaggaagcaaga
gcgaacggtgtccttaatgaagatcaggatattgacccggtaccgcaaattactcgattg
cacgttgaagaggccatgcgcggtgctcgtcgctctgtcagtgacgctgacatccgcaag
tacgaacttttcgccacgtcgcttcagcagtcacgtgcattcggtaacgtgagtttggac
cccggtaatcagggcggagcgggaggtgatgccggtgcaggagatgacgatctctatagt
tga |
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