Trypanosoma brucei brucei: Tb10.70.1900
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Entry
Tb10.70.1900 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03022
Basal transcription factors
tbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tb10.70.1900
09124 Replication and repair
03420 Nucleotide excision repair
Tb10.70.1900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb10.70.1900
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb10.70.1900
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Tb10.70.1900
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Tb10.70.1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
3661934
NCBI-ProteinID:
XP_822766
UniProt:
Q38B82
LinkDB
All DBs
Position
10:1290069..1291571
Genome browser
AA seq
500 aa
AA seq
DB search
MNPSYLNQILSYPQRESLISECPALALLCYQELVAAFRKGKRIADPLSLRDDVTVLLSIG
SLHELTDRIFSAAPHESALPPLWCTLRKALECAWDPRGDGERQCELTMVGGKLRFYKKKC
DRMPLAQSSMRNALNMSRTRIREVIACALSGSLEPLGGRRNEPIAALLQFSRLIPPPSEE
RVVTSEGLAFCMQPLQQQWWTLVSVVLDRALAIMSGKGVSRATLWQLLAVLFALNTSDYV
YLFPSKDDDLEAFQLLARLSEVGLVYPLICNGEKCFVLSPHFHHAICWSSTPSLCTAALL
DDTRGPSSRLRREDEDTIITETNFRLYAYTKNPDMLRILDQFAVKEVDVVGMVVCYRVTR
ASFASALAKGIGANHILQFLTVKAHPSMIKQSNSEAGDPSCPVLPAASVGFGNTSEYRQG
NIIPQSFCDQLFTWERECRRLIFRHDVVLLKNIGKEQMEIILNCLSNSGEQHAVVHRESG
TLAIEQEVYTRVLSNFITPD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcctatttgaatcagatattgagttacccccaacgcgaatcgctaatttcg
gagtgccccgcgcttgcactcctctgctatcaggaattagtggctgccttccgcaaaggg
aaacgcattgctgatccgctgtctttgagggatgatgtcacagtcctactttccattgga
tcgttgcatgaactgacggaccggattttctcagctgcaccgcatgaatccgctttgcct
cctctctggtgtacgcttcggaaggctcttgagtgtgcctgggaccccagaggtgatggt
gagcgacaatgtgaactaacgatggtgggtgggaaactccgattttacaagaaaaaatgt
gataggatgccgcttgcacagtcatcaatgcggaacgcacttaatatgagtagaacacgc
attcgagaagttattgcctgtgccctatcgggttcactggagccccttggagggagacgt
aacgagcctatcgctgcattacttcagttttcccgcctgatcccaccaccgtcggaagag
cgggtcgtcacctctgaaggattggcattttgcatgcagccccttcaacaacagtggtgg
acattagtatctgttgtgttagatcgcgcactggccataatgtcgggtaaaggagtctca
cgcgccactctttggcagcttctagctgttctgtttgcacttaacacaagtgattatgtt
tacttgtttccttcaaaggatgatgaccttgaggcctttcaactgctggcgcgcctctcg
gaggtcgggttggtttacccccttatttgtaacggagagaaatgctttgtgctttctccc
cacttccaccacgccatatgttggagttctacaccatcgctttgcacagcggcattgctg
gacgacacgaggggtccatcgtctcgtctacggcgggaggatgaagatactatcatcact
gaaacaaattttcgactatacgcatacacgaaaaatcctgacatgctgcgcattcttgat
caatttgcggtaaaggaagtggatgtggtgggaatggttgtatgctacagggtgacacga
gcatcatttgcaagtgcactagcgaaaggcataggcgcaaaccatatattgcaatttctt
acggtgaaggcacatccttctatgatcaagcagagcaatagtgaggctggtgacccgtcg
tgcccggttctccccgctgcttctgtgggattcggtaatacatctgaatatcgtcaggga
aatattataccacaatccttttgtgatcaactgttcacgtgggagagggaatgccgaaga
ctaatttttcgtcacgatgtggtgctgttgaaaaatatcgggaaagagcagatggaaata
atcttaaactgtctttcaaatagtggggaacagcacgccgtggtgcatcgcgagagcggt
actttggccattgaacaggaggtttacacgcgtgtactgtccaatttcattactccggat
taa
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