KEGG   Trypanosoma brucei brucei: Tb10.70.1900
Entry
Tb10.70.1900      CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03022  Basal transcription factors
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Tb10.70.1900
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tb10.70.1900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb10.70.1900
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb10.70.1900
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Tb10.70.1900
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Tb10.70.1900
SSDB
Motif
Pfam: Tfb2 Helicase_C_3
Other DBs
NCBI-GeneID: 3661934
NCBI-ProteinID: XP_822766
UniProt: Q38B82
LinkDB
Position
10:1290069..1291571
AA seq 500 aa
MNPSYLNQILSYPQRESLISECPALALLCYQELVAAFRKGKRIADPLSLRDDVTVLLSIG
SLHELTDRIFSAAPHESALPPLWCTLRKALECAWDPRGDGERQCELTMVGGKLRFYKKKC
DRMPLAQSSMRNALNMSRTRIREVIACALSGSLEPLGGRRNEPIAALLQFSRLIPPPSEE
RVVTSEGLAFCMQPLQQQWWTLVSVVLDRALAIMSGKGVSRATLWQLLAVLFALNTSDYV
YLFPSKDDDLEAFQLLARLSEVGLVYPLICNGEKCFVLSPHFHHAICWSSTPSLCTAALL
DDTRGPSSRLRREDEDTIITETNFRLYAYTKNPDMLRILDQFAVKEVDVVGMVVCYRVTR
ASFASALAKGIGANHILQFLTVKAHPSMIKQSNSEAGDPSCPVLPAASVGFGNTSEYRQG
NIIPQSFCDQLFTWERECRRLIFRHDVVLLKNIGKEQMEIILNCLSNSGEQHAVVHRESG
TLAIEQEVYTRVLSNFITPD
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgaacccgtcctatttgaatcagatattgagttacccccaacgcgaatcgctaatttcg
gagtgccccgcgcttgcactcctctgctatcaggaattagtggctgccttccgcaaaggg
aaacgcattgctgatccgctgtctttgagggatgatgtcacagtcctactttccattgga
tcgttgcatgaactgacggaccggattttctcagctgcaccgcatgaatccgctttgcct
cctctctggtgtacgcttcggaaggctcttgagtgtgcctgggaccccagaggtgatggt
gagcgacaatgtgaactaacgatggtgggtgggaaactccgattttacaagaaaaaatgt
gataggatgccgcttgcacagtcatcaatgcggaacgcacttaatatgagtagaacacgc
attcgagaagttattgcctgtgccctatcgggttcactggagccccttggagggagacgt
aacgagcctatcgctgcattacttcagttttcccgcctgatcccaccaccgtcggaagag
cgggtcgtcacctctgaaggattggcattttgcatgcagccccttcaacaacagtggtgg
acattagtatctgttgtgttagatcgcgcactggccataatgtcgggtaaaggagtctca
cgcgccactctttggcagcttctagctgttctgtttgcacttaacacaagtgattatgtt
tacttgtttccttcaaaggatgatgaccttgaggcctttcaactgctggcgcgcctctcg
gaggtcgggttggtttacccccttatttgtaacggagagaaatgctttgtgctttctccc
cacttccaccacgccatatgttggagttctacaccatcgctttgcacagcggcattgctg
gacgacacgaggggtccatcgtctcgtctacggcgggaggatgaagatactatcatcact
gaaacaaattttcgactatacgcatacacgaaaaatcctgacatgctgcgcattcttgat
caatttgcggtaaaggaagtggatgtggtgggaatggttgtatgctacagggtgacacga
gcatcatttgcaagtgcactagcgaaaggcataggcgcaaaccatatattgcaatttctt
acggtgaaggcacatccttctatgatcaagcagagcaatagtgaggctggtgacccgtcg
tgcccggttctccccgctgcttctgtgggattcggtaatacatctgaatatcgtcaggga
aatattataccacaatccttttgtgatcaactgttcacgtgggagagggaatgccgaaga
ctaatttttcgtcacgatgtggtgctgttgaaaaatatcgggaaagagcagatggaaata
atcttaaactgtctttcaaatagtggggaacagcacgccgtggtgcatcgcgagagcggt
actttggccattgaacaggaggtttacacgcgtgtactgtccaatttcattactccggat
taa

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