Trypanosoma brucei brucei: Tb10.70.5460
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Entry
Tb10.70.5460 CDS
T01013
Name
(RefSeq) vacuolar protein sorting-associated protein 35, putative
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tb10.70.5460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbr04131
]
Tb10.70.5460
Membrane trafficking [BR:
tbr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
Tb10.70.5460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
3663050
NCBI-ProteinID:
XP_822481
UniProt:
Q38C17
LinkDB
All DBs
Position
10:586981..589782
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AA seq
933 aa
AA seq
DB search
MYGHVVVEEPPTVLSLQGPLLTPQQEQEKWLCDSLETVKEVEAEMKLYIRRREQRNVWNA
AAKMLAEMRTDVLAPQYYYELYLKVFDVLQVLHQFVEDEYREGCSLEEMYDVVQHTGSIV
PRLYLLITVGSVAIKSGEQPAVEIMRDLVEMCKGVQHPTRGMFLRHYLLTVTKNRLPGEG
GYTGSKSTEGGGGTVDETIELLLQNFKEMNWLWIRMDLKGQQRTGDQQRTQQRARRDRKE
LCVLVGMNIVRLAQLDGVERETYQTSILPRLLQIIVGYRESLAQQYLFEVVVQVFPDEFH
LFSLEQLLAALGQLQSKVDVSAILSALLQRLGKYAELMNEGVAEAGSSTEKELLMTMFDT
VKTRLDDMADATKTALQALHGGDVNTQGKDGVEGVSILSGKSKHPYMLTFFSYIKSMYSL
AELALKVNPATAPQNIGLIFTGIANRLPPALEQNIMLGVGRLIIRVIECLKDPSVVLDLE
GIDVLVQPLCASTRRSIALALCTACLHSPSYRISTIKLAARLFELIAPLVYDEGDVAGGS
NQPEKPVQEGTTFTGETQIDEKSAEEQQLVCRVLHLLQCDDVGIQAKIMNGVRKQLTKGG
PQRIVATLPTLLSMYMQLALRVMKGATVTLDPDTAEAGEEERGSGGEGKPTENVEKTKSV
TTFDMEEARALCSKIFHFVHSGDGKGVLEVLAGEAPQQAFYLYLSSAATADVCELSEVIY
EHFVSAFQIYEQSGVDMSEQIAMVGYAVAQLHALHSLPEETYELLATKVCQYSSKLLRKS
DQSRLVALCAHLFWKKDLSQDSNNRIVECLQRALKIANHAASQQSKQQQQLFVELLNLFL
HYYAGRAPGVTARHVTGLLDLAQDSLTKLKQQDDGEDNENEDEKDRSVKGETSEEVRRYY
DNTIQYIRTRQEVDERWKEIGMTEGEGEAADNE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtacggccatgttgtggtggaggagccaccaacagttttatcccttcagggaccactt
cttacaccacagcaggagcaggagaaatggctctgtgattcgcttgagacggtgaaggag
gttgaagccgaaatgaaactgtacatccgccgccgagagcagcgtaacgtgtggaatgca
gcagcgaaaatgttagcggagatgcgaaccgatgttctagctccacagtattattatgag
ctttacttgaaggtatttgacgtactacaggttctacatcagtttgtggaagatgaatat
cgagaggggtgctcgctggaggagatgtatgatgtggtgcagcacacggggagtattgtc
ccacgtttgtatctgctgatcaccgttgggtcggtggccatcaagtcaggggaacaaccg
gctgttgaaataatgcgcgatttggtggaaatgtgcaaaggcgtacagcaccccacgcgc
gggatgttccttcgccactatttgctaactgtgacgaagaacagactaccaggtgaaggc
ggttacacaggttctaagtccacagagggcggaggcgggacggtagatgaaacgattgag
ctgcttctgcaaaacttcaaagaaatgaactggctgtggatccgcatggatctaaagggg
caacaacgtactggggaccagcagcgaacacaacagcgggcgcgcagggatcgaaaggag
ttgtgtgtactcgttggcatgaacattgtgcgtctcgctcagcttgacggtgtggagcgc
gaaacttatcaaacctccatacttccgcgtctccttcaaataattgtgggttatcgtgag
tcacttgcgcaacagtacctttttgaggtggttgtgcaggtgtttcctgacgagttccat
ctgttcagtcttgaacagttactcgctgctctggggcagcttcagtccaaggtggatgta
agtgccatactttctgcgctattgcaacggttgggaaagtatgctgagttgatgaatgag
ggagtggcggaagccggaagcagtaccgagaaggaactgttgatgacgatgtttgataca
gtgaaaactcgtcttgacgacatggcagatgctaccaagaccgctctccaagccctgcac
ggcggcgacgtaaatacccaagggaaggatggggtagagggcgtctccattctttccggc
aagagcaagcatccatacatgttaactttcttttcgtacattaagtcaatgtacagtttg
gctgaacttgcgctcaaagtaaaccccgctacggctccacaaaatattgggcttattttc
acgggcattgcgaaccgtttgcctcccgcacttgaacaaaacataatgcttggggtgggc
cgtctcattatccgcgtgatagagtgcctgaaagatcctagcgtggtgctggaccttgag
ggcattgatgtgttggtacaacctctgtgcgcctccacacgtcgctccatcgctcttgca
ctctgtacagcatgcttgcattccccctcgtatcgaatttctaccatcaagttggctgcg
cggctgtttgaacttattgcgccactcgtatacgacgaaggcgatgttgcggggggaagc
aaccagcctgaaaaacctgtccaggagggtacaacttttaccggtgaaactcaaatcgac
gagaagagtgcggaggaacaacagcttgtctgtcgtgtgcttcatttactacagtgtgac
gatgtagggattcaagcgaagataatgaacggtgtgaggaaacaactgacaaaaggtggg
ccgcagcggattgtagccactttgccgacgcttttgtccatgtatatgcagttggcactg
cgcgtcatgaaaggggccacggtgacgctagatcccgacacagcagaagcaggggaggag
gagagagggagtggtggggaggggaaaccgaccgaaaacgtagaaaaaacaaaatccgtt
accacttttgacatggaggaggctagggctctgtgttctaagatattccattttgttcat
tctggtgatggcaagggtgtattggaggtactcgcgggtgaggccccacagcaagcattc
tacctctacctttctagtgctgcgacggcagacgtatgtgagctttccgaggtgatctac
gaacattttgtgagtgcgtttcaaatatatgaacaatccggtgttgacatgagcgagcaa
attgcaatggtcgggtacgccgtggcgcaactgcatgccttacactcgctgccagaggaa
acatatgagcttttggctaccaaggtgtgccaatattcttccaagctgttgcgtaagagt
gatcagagccgccttgtagctctttgtgcacatctcttctggaaaaaagacctttcacag
gacagtaataatcgcattgtggaatgcctacagcgagcgctgaagattgctaaccatgcg
gcttctcaacaatcaaagcagcaacagcaactgttcgtagagttgcttaaccttttccta
cactactatgctggacgtgcccctggtgtcaccgctcggcacgtcaccggtcttcttgat
ctcgcacaggactctctcaccaagcttaagcaacaagacgatggtgaagataacgagaat
gaagatgaaaaggacaggagtgtcaagggggagactagtgaagaggtgcggcggtactac
gacaacacaattcagtacattcgtacacggcaggaagttgatgagcggtggaaggaaatt
ggcatgacagagggagaaggcgaggccgctgataatgagtag
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