Trypanosoma brucei brucei: Tb11.01.0280
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Entry
Tb11.01.0280 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tb11.01.0280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbr03009
]
Tb11.01.0280
Ribosome biogenesis [BR:
tbr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Tb11.01.0280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR75_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40
Motif
Other DBs
NCBI-GeneID:
3665908
NCBI-ProteinID:
XP_828901
UniProt:
Q384J2
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Position
11
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AA seq
805 aa
AA seq
DB search
MFRRAYHTNLGNAHLYHPLHQPKFHRKDTNLRVQRKQGHTAHMTSPHLLTFSQEAVCVAE
EFGVAFYAPKNLKKFQVERFNGVRIAGIYATKASDGGSHLHVVDVEANWFLVSLSRVEVV
SSSSIELSEENSVKQSESSRHSEECARRLPNTEGILEAHFHEAGGVLHCVVLTRWGAYET
VLTNTSRIVARNIISFPFEMRNCFMSVGRTSGLVVVCQRSEKWLRYSLFEQRDNERIRMF
DSPVNVQSFAVNPISNSVVLGGTRGEMVLYPSITEKNYFSDHWHHTPLTALSFSIDGKAF
YSGAREGMILVWNTSSYTYKKVSCGLGCINSIAVPTGNGSRVLLSCAESTIAVLDLLQMQ
VEKFVEGVQWSTDESCSGLVVSQWMGQPAVILTGLPNVVRVCDPFTQQAIYSLHISSQME
TIPSPPRHGIQYVGLLNNNRTIVTYEEFSGVSLPSLLRFWAYSSDSKRHEESMTICSPHR
SQVLALTTDDTQQRVFTLSGEAMKCWVECKEDLNDAHAIGKKTWGNQSSCVTPSRLVQDL
IISHDGSLCFISDDNVHVYNVKALHPGQPWQRVLTLTQHFSLSPLKNLTLLHECRALVAT
DAERVYFWSLAKPRRQATIWKDKGVGGKAAGITAMCGFSVNSVLVATERCNLWELSAADV
NEMGKVVGQANSATEHRITFMKPLSLLKQPDRIAVVDSVSGFRVMHVSLEGKGGVNVQQF
ERTTARDESNETLSSLKQYFQEAPVRSNNFDGADENASTILDRASQVAEAQKWLVGVLAD
SAYTAPPMSALLSSYLQRRAGVATF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaagggcgtatcacacgaaccttgggaatgcccacttgtatcatcctcttcac
caacctaagtttcaccgcaaggatacaaatttaagggtccagagaaaacagggtcacacg
gcccatatgacgtcacctcacctccttacgttcagccaagaagctgtgtgcgttgccgag
gagtttggtgtggctttctatgctccgaagaacttgaagaaatttcaggttgaacgcttc
aacggggtgaggattgcagggatatacgctacaaaggcctctgacggtgggtctcacctc
catgtagtggatgttgaggccaactggttccttgtctccctttctcgcgttgaggtagtc
tcctcatcatccattgaactttctgaagaaaattctgtcaagcaaagtgagtcctcgcgc
cactccgaggaatgcgcgcgtcgactaccgaacactgaagggattttggaggctcacttt
catgaggccggtggcgtacttcactgcgtggttctcacacgatggggtgcatatgaaacg
gtgctaactaatacaagcagaatagtggcgaggaacattatatcttttccgtttgagatg
cggaattgttttatgtccgtagggagaacaagtggtcttgttgttgtttgccagcggagt
gagaagtggctgcgatactcccttttcgagcagcgtgataacgagcgtatcaggatgttt
gattctccagttaatgttcaaagctttgctgtgaaccccatttccaattcagtggttttg
ggcggtacacggggtgagatggtactttacccttctattactgagaagaattatttttca
gatcattggcatcatacgccgttaacggcgctcagtttttccatagacgggaaagcattt
tactcaggggcccgtgaagggatgatattggtgtggaatacctcgtcatatacctacaag
aaggtaagctgtggtttgggttgtatcaacagcatcgcagtgccaacgggaaatggttca
agagtattactgagttgcgccgaatccaccattgccgtgcttgacctcttgcaaatgcag
gtagagaagttcgttgagggcgtacagtggtctaccgatgagtcgtgtagcgggctcgtg
gtgagtcagtggatgggccagccggcagtgattcttacggggttgcctaacgtggtgcgt
gtttgtgatcccttcactcagcaggcgatctactctcttcacatatcttcccagatggag
actataccgagccccccgcgtcatggcattcaatacgtggggttgctaaacaacaaccgc
acaatagtaacctatgaggaatttagtggtgtttcgttgccgtcgttattgcgcttctgg
gcatacagttctgattctaaacggcatgaagaatcgatgacaatttgttcaccccatcgc
agtcaagtactggcactgacgacggatgacacccagcagcgagtctttaccctcagtggc
gaggcgatgaaatgctgggtggaatgcaaagaagatcttaacgatgcgcacgcaatcggg
aagaagacttggggcaaccaatcgagctgcgtaactccgtcgcgccttgtgcaggattta
attatttcccacgacggctccttatgtttcatctccgatgataatgttcacgtctataac
gtcaaagccttacatccgggacaaccatggcagcgggttctcaccttaacgcaacatttt
tcactttctccgctgaagaatctgacgctactgcacgagtgccgtgcacttgtggccact
gacgccgaacgcgtgtacttttggtcgttagccaagcctcgccggcaggcaacgatatgg
aaggacaaaggagtcggagggaaggcggctggcatcacagccatgtgcgggttttcagtg
aattctgttcttgtggcaacagaaagatgcaacctctgggagctgagcgctgcagacgtg
aacgaaatgggaaaggttgttggtcaagcaaatagcgccacggagcaccgtattacattc
atgaaaccactgtcccttcttaagcagccagaccgaattgcagtagtggacagcgtttct
ggttttcgagtcatgcacgtctcactggaagggaagggaggagttaatgtgcagcaattt
gagcgtaccactgcgagagacgaatctaatgagacactctcgtcgctaaaacagtacttt
caggaggcccctgtgagaagcaacaactttgacggagcggacgaaaatgcctccaccatc
ctggaccgcgcatctcaagtggcagaggcacagaaatggctggtgggggtcctggcggac
tccgcctacaccgccccacctatgagtgccttgctttcttcatatttgcagagacgtgcg
ggtgtagcaacgttttga
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