KEGG   Trypanosoma brucei brucei: Tb11.01.0280
Entry
Tb11.01.0280      CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Tb11.01.0280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbr03009]
    Tb11.01.0280
Ribosome biogenesis [BR:tbr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Tb11.01.0280
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_WDR75_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st Beta-prop_HPS5 EIF3I WDR90_beta-prop_4th Beta-prop_TEP1_2nd WD40
Other DBs
NCBI-GeneID: 3665908
NCBI-ProteinID: XP_828901
UniProt: Q384J2
LinkDB
Position
11
AA seq 805 aa
MFRRAYHTNLGNAHLYHPLHQPKFHRKDTNLRVQRKQGHTAHMTSPHLLTFSQEAVCVAE
EFGVAFYAPKNLKKFQVERFNGVRIAGIYATKASDGGSHLHVVDVEANWFLVSLSRVEVV
SSSSIELSEENSVKQSESSRHSEECARRLPNTEGILEAHFHEAGGVLHCVVLTRWGAYET
VLTNTSRIVARNIISFPFEMRNCFMSVGRTSGLVVVCQRSEKWLRYSLFEQRDNERIRMF
DSPVNVQSFAVNPISNSVVLGGTRGEMVLYPSITEKNYFSDHWHHTPLTALSFSIDGKAF
YSGAREGMILVWNTSSYTYKKVSCGLGCINSIAVPTGNGSRVLLSCAESTIAVLDLLQMQ
VEKFVEGVQWSTDESCSGLVVSQWMGQPAVILTGLPNVVRVCDPFTQQAIYSLHISSQME
TIPSPPRHGIQYVGLLNNNRTIVTYEEFSGVSLPSLLRFWAYSSDSKRHEESMTICSPHR
SQVLALTTDDTQQRVFTLSGEAMKCWVECKEDLNDAHAIGKKTWGNQSSCVTPSRLVQDL
IISHDGSLCFISDDNVHVYNVKALHPGQPWQRVLTLTQHFSLSPLKNLTLLHECRALVAT
DAERVYFWSLAKPRRQATIWKDKGVGGKAAGITAMCGFSVNSVLVATERCNLWELSAADV
NEMGKVVGQANSATEHRITFMKPLSLLKQPDRIAVVDSVSGFRVMHVSLEGKGGVNVQQF
ERTTARDESNETLSSLKQYFQEAPVRSNNFDGADENASTILDRASQVAEAQKWLVGVLAD
SAYTAPPMSALLSSYLQRRAGVATF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgttcagaagggcgtatcacacgaaccttgggaatgcccacttgtatcatcctcttcac
caacctaagtttcaccgcaaggatacaaatttaagggtccagagaaaacagggtcacacg
gcccatatgacgtcacctcacctccttacgttcagccaagaagctgtgtgcgttgccgag
gagtttggtgtggctttctatgctccgaagaacttgaagaaatttcaggttgaacgcttc
aacggggtgaggattgcagggatatacgctacaaaggcctctgacggtgggtctcacctc
catgtagtggatgttgaggccaactggttccttgtctccctttctcgcgttgaggtagtc
tcctcatcatccattgaactttctgaagaaaattctgtcaagcaaagtgagtcctcgcgc
cactccgaggaatgcgcgcgtcgactaccgaacactgaagggattttggaggctcacttt
catgaggccggtggcgtacttcactgcgtggttctcacacgatggggtgcatatgaaacg
gtgctaactaatacaagcagaatagtggcgaggaacattatatcttttccgtttgagatg
cggaattgttttatgtccgtagggagaacaagtggtcttgttgttgtttgccagcggagt
gagaagtggctgcgatactcccttttcgagcagcgtgataacgagcgtatcaggatgttt
gattctccagttaatgttcaaagctttgctgtgaaccccatttccaattcagtggttttg
ggcggtacacggggtgagatggtactttacccttctattactgagaagaattatttttca
gatcattggcatcatacgccgttaacggcgctcagtttttccatagacgggaaagcattt
tactcaggggcccgtgaagggatgatattggtgtggaatacctcgtcatatacctacaag
aaggtaagctgtggtttgggttgtatcaacagcatcgcagtgccaacgggaaatggttca
agagtattactgagttgcgccgaatccaccattgccgtgcttgacctcttgcaaatgcag
gtagagaagttcgttgagggcgtacagtggtctaccgatgagtcgtgtagcgggctcgtg
gtgagtcagtggatgggccagccggcagtgattcttacggggttgcctaacgtggtgcgt
gtttgtgatcccttcactcagcaggcgatctactctcttcacatatcttcccagatggag
actataccgagccccccgcgtcatggcattcaatacgtggggttgctaaacaacaaccgc
acaatagtaacctatgaggaatttagtggtgtttcgttgccgtcgttattgcgcttctgg
gcatacagttctgattctaaacggcatgaagaatcgatgacaatttgttcaccccatcgc
agtcaagtactggcactgacgacggatgacacccagcagcgagtctttaccctcagtggc
gaggcgatgaaatgctgggtggaatgcaaagaagatcttaacgatgcgcacgcaatcggg
aagaagacttggggcaaccaatcgagctgcgtaactccgtcgcgccttgtgcaggattta
attatttcccacgacggctccttatgtttcatctccgatgataatgttcacgtctataac
gtcaaagccttacatccgggacaaccatggcagcgggttctcaccttaacgcaacatttt
tcactttctccgctgaagaatctgacgctactgcacgagtgccgtgcacttgtggccact
gacgccgaacgcgtgtacttttggtcgttagccaagcctcgccggcaggcaacgatatgg
aaggacaaaggagtcggagggaaggcggctggcatcacagccatgtgcgggttttcagtg
aattctgttcttgtggcaacagaaagatgcaacctctgggagctgagcgctgcagacgtg
aacgaaatgggaaaggttgttggtcaagcaaatagcgccacggagcaccgtattacattc
atgaaaccactgtcccttcttaagcagccagaccgaattgcagtagtggacagcgtttct
ggttttcgagtcatgcacgtctcactggaagggaagggaggagttaatgtgcagcaattt
gagcgtaccactgcgagagacgaatctaatgagacactctcgtcgctaaaacagtacttt
caggaggcccctgtgagaagcaacaactttgacggagcggacgaaaatgcctccaccatc
ctggaccgcgcatctcaagtggcagaggcacagaaatggctggtgggggtcctggcggac
tccgcctacaccgccccacctatgagtgccttgctttcttcatatttgcagagacgtgcg
ggtgtagcaacgttttga

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