Trypanosoma brucei brucei: Tb11.01.0870
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Entry
Tb11.01.0870 CDS
T01013
Name
(RefSeq) replication factor A 51kDa subunit
KO
K07466
replication factor A1
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03030
DNA replication
tbr03420
Nucleotide excision repair
tbr03430
Mismatch repair
tbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tb11.01.0870
03420 Nucleotide excision repair
Tb11.01.0870
03430 Mismatch repair
Tb11.01.0870
03440 Homologous recombination
Tb11.01.0870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbr03000
]
Tb11.01.0870
03032 DNA replication proteins [BR:
tbr03032
]
Tb11.01.0870
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb11.01.0870
Transcription factors [BR:
tbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Tb11.01.0870
DNA replication proteins [BR:
tbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Tb11.01.0870
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Tb11.01.0870
MMR (mismatch excision repair)
Tb11.01.0870
DSBR (double strand breaks repair)
HR (homologous recombination)
Tb11.01.0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
POT1
tRNA_anti_2
zinc_ribbon_15
Motif
Other DBs
NCBI-GeneID:
3664078
NCBI-ProteinID:
XP_828978
UniProt:
Q384B5
LinkDB
All DBs
Position
11
Genome browser
AA seq
463 aa
AA seq
DB search
MQQPSQQQIQPIDSLSPFLGGKWWIRARVTDKSEIRTWNKPTSQGKLFSFTLIDESASIR
ATVFNEAVDMFNPLIVNGQVYYFSGGQVKNANRKFSNVNNDYELSFDNTCQISAARDVVS
SSIPLQRYNFVPIAILKQREVGSLVDVLAVVLNVEELGTIVQRSTGRELVRRTVKVADST
AGIDVTLWNENAKEWPHQPGTVLAMRQLKVGSFDGVTLSTTMQSSFDVNPNIPDVKKLRE
WFESTGGRDVSSLSMQGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPV
YLKQDTQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQRYLVSIQVTDNVSQVWLT
LFNESGAEFFGMTAPELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGGNEDSERV
RLNVVRITEFMPLDTVTEDKRQAMAAQLRQECDEMIKCINAYL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccatcacaacaacagattcaaccaatcgattccttgtcgccattccttggc
ggcaagtggtggattcgcgctcgcgtgacggacaagtctgaaatacgaacgtggaataaa
ccaacctcacaggggaagctgttttcttttacgctcattgacgagtctgcttctatccga
gcgacggtattcaatgaggccgtcgacatgttcaatcccctcatagtgaacggacaggtt
tactactttagtgggggtcaggtaaaaaatgccaaccgtaagttcagtaatgtgaataat
gactacgagttgagctttgacaacacctgtcaaatatcagcagcaagggatgtcgttagc
tcgtcgattcccctacagcggtataactttgtgccaattgccatcctcaagcaacgagaa
gtcggttctttagtcgacgtgctggctgttgtgttgaatgtggaggaattgggcaccatc
gtacagagatcaactggtcgtgagttggtcagacgcaccgtgaaggttgccgattccacc
gcggggattgacgtcaccctgtggaacgaaaacgccaaagagtggccacatcaacctggc
accgtactggcaatgcggcaacttaaggtggggagttttgatggtgtaacgctctccaca
acaatgcagtcatcgtttgatgttaatccaaacatccctgacgtgaagaagcttcgtgaa
tggtttgaatctacgggtggacgggacgtcagttcactttcaatgcagggaaataatgct
ttggggctcgcgagcagtggagaaacctaccgcggctacaagtacattgatgacataacg
actgaggggctcggaaaaggcccgaagccggactacatcgatttgcgttgcgttcctgtt
tacctcaaacaggatacacagtggtacgatgcctgtccacaatgcaacaagaaagtgatg
ctcgaaggggcaatgggtgatcgcttccgttgtgagaaatgtgaccaatctattgtacca
acacaacggtacttggtgtctattcaagtcacagataacgtttcgcaggtgtggctcacg
ctctttaatgagtcgggagccgagttctttggcatgacggctcctgaactaaaaagacgt
caggaggaggatcccatgtttgtgacaaaagtggcccagatgcgcatgaaccgtcctgtg
ctcatgcgtcttcgtgtgaaggaggagggtctcggtggcaatgaagattcggaaagggtg
cgcttaaatgttgtgcgcattacggagtttatgccgctggacaccgtgacggaggataag
cgacaagccatggcggcacaactgcggcaggagtgcgacgaaatgattaaatgcattaat
gcctacttgtaa
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