Trypanosoma brucei brucei: Tb11.01.5940
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Entry
Tb11.01.5940 CDS
T01013
Name
(RefSeq) exportin 1
KO
K14290
exportin-1
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03008
Ribosome biogenesis in eukaryotes
tbr03013
Nucleocytoplasmic transport
tbr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tb11.01.5940
03008 Ribosome biogenesis in eukaryotes
Tb11.01.5940
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tb11.01.5940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb11.01.5940
03009 Ribosome biogenesis [BR:
tbr03009
]
Tb11.01.5940
03016 Transfer RNA biogenesis [BR:
tbr03016
]
Tb11.01.5940
03036 Chromosome and associated proteins [BR:
tbr03036
]
Tb11.01.5940
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tb11.01.5940
Ribosome biogenesis [BR:
tbr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Tb11.01.5940
Pre-60S particles
Tb11.01.5940
Transfer RNA biogenesis [BR:
tbr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Tb11.01.5940
Chromosome and associated proteins [BR:
tbr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Tb11.01.5940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
Motif
Other DBs
NCBI-GeneID:
3665310
NCBI-ProteinID:
XP_829490
UniProt:
Q382A3
LinkDB
All DBs
Position
11
Genome browser
AA seq
1033 aa
AA seq
DB search
MEDILDFSKPVDVQRFDQVVQYLSTGSPQEIVRAQEVLTAFKERPDSFLRVGDLLTKSVN
LTTRFFALQVLEDAILHRWNTFTAEQCQEIRNFVVNMIVGECVSFNQIRSRRALLMKMNS
ALVSIAKREWPVRWPTFIKDVCSSAGPDEPLVENNLNILRMVGEEIFEFSEKTLTTRWLK
RKKEALQSDFQAILQLCLSILSTSDEALLKTNLECLEKYLSWVEPASVFNEELLKYLAGL
IARKSAVSRCAVRCLTVACSVETDHGSVGDAQAQVMVRVFRTILDNIMNLLPTNHSSVEA
RIVQFSNMEGSVDAGFVGDLNLLLVAFLKHYTRNIMYDDLLLISANQLIVGMSHINDKEL
FKSCVDYWWWLGEKMVRSASPTPLHRKLALVLSNVRFTLIKKMARPEEVIIVVEDGEVRR
VHMKDVEELQLYKLMRETLVFLTYLDPQDMQAIMTKIVMKLEDLSEWSWHNCNTLSWAVG
AISVALTEEQESSLFVVIVRGLLDLCSKLQGKENRAVVASGIMFVVGQYPRFLRAHQPFF
RAVVKKVIEFMCDLFPGVQEMAVDTLLKVASQVPDQFVCVKNNGISLAEETAKRWTEITS
LLKPQHMHTCFVAAGWMVKGEKPERQPSLLGMFLQDANDSFRIIVERAASKGPAFGEDFS
GMGELIHILRVFSSIASSCGTSFVNEMGIIIYDLQGLYRTFFSAQTALVADHGTDAMERQ
EARYLRLAKREILRIFECFVDNTEECDFVATNCMPSILTTVLEDYRDSLPIVKEAGALAL
VTACVNKLGTRLAGDCAAILDHTFDTTISMICANAEDFPEFRVNLFKLLHALNTRCFSNF
LSYASTKGDVINGMLWVIKHTDFAIMETGLKTLDAFLENVSRSELLQPFYDAFMQQIFVE
VLVSAMDSLHAAGFELHCSILIKLFTVSSMFPVDLPKLGRNDIESFLCENLSTIATLTPV
LIKQFIAGAYEKYGDPVEFRRSFADFLIEMQVWGAEEENRLQQEEEQRRREEDIPGFAAL
SVKGPPPTPSFYP
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattctcgacttcagcaagcccgtcgatgtgcagcgtttcgaccaggtagtg
caatacctctcaacaggctcaccacaagagatcgtgagggcgcaggaggttcttaccgca
ttcaaggagagacccgactcctttttacgcgtaggagaccttctcaccaaatcggtgaac
ctcacgacacgtttttttgcacttcaggttctggaggacgcgattctacaccgatggaac
acattcactgcggaacagtgtcaggaaattcgtaactttgttgttaacatgattgtaggt
gaatgcgtgagcttcaatcaaattcgtagtaggagggctcttcttatgaagatgaatagt
gcgcttgtgtcaatagcgaagcgtgagtggcccgttcgttggccgaccttcataaaggac
gtgtgcagtagtgctgggccagatgaacctcttgtagaaaacaacctgaacattctccgc
atggtgggcgaggagatatttgaatttagcgagaaaactttaacgactcgatggttgaaa
cgaaagaaggaggcactgcaaagcgactttcaggcaattcttcaattgtgtctttcgatt
ctatccactagtgacgaggcgcttctcaaaaccaatctggagtgcctggagaaatatctt
tcctgggtagaaccggcgtccgtgtttaacgaggaattactgaagtatcttgcgggacta
atcgcacggaagtctgccgtatcgcgctgcgcggtgcgttgtcttacagttgcgtgctcc
gtggagacagatcacggctcagttggggacgcgcaagcgcaggtgatggttcgtgtgttt
cgcacaatcctcgataatattatgaacttacttcccacgaatcactcttctgttgaagcg
cgtatcgtccagttttccaacatggaagggagtgtggatgcaggctttgttggcgatctc
aatcttttgttggttgcgtttttgaagcactatacgagaaatattatgtacgacgatctc
ttgttgatatctgccaaccaattgatcgtgggaatgagtcatattaacgacaaggagcta
ttcaaatcctgtgttgactactggtggtggcttggtgaaaagatggtgcggtccgcatca
cctacaccgctacaccggaagctggcacttgtactcagcaatgttcgctttactctcatc
aagaaaatggcaagaccggaggaagtcattattgtagtcgaagacggtgaggtgcgcagg
gtgcacatgaaggatgtggaggaactacaactctacaaattaatgcgggagacgcttgtt
tttttaacatacctcgatcctcaagatatgcaggcgattatgactaaaatcgttatgaag
cttgaagaccttagcgaatggagttggcacaactgcaacacattatcatgggcagtcggg
gcgatatctgtggccctgactgaggaacaagaatcttcactatttgtagttattgtacgt
ggcctgctagatctttgtagcaagctacaaggaaaggaaaaccgtgccgttgttgcgagt
ggtatcatgtttgttgttgggcagtacccccgtttcctgcgtgctcatcagccctttttc
cgcgcagtggtgaagaaggtaattgaattcatgtgcgacttattccctggtgtgcaggaa
atggctgtggatactcttttgaaggtggcctcgcaggtaccagatcagtttgtttgtgtc
aagaacaatgggatttccctcgctgaggaaacggcgaagcggtggactgaaataacgtct
ttgttaaaaccccaacatatgcacacatgttttgttgcagctggttggatggtgaaggga
gagaagccagagcggcagccgagtctgttaggcatgtttctccaagatgcgaacgacagt
tttaggattattgtggagcgagcagcctctaaaggtccggcctttggggaagacttttct
ggtatgggggagttaatacacattttacgtgtctttagcagcattgcgtcatcttgtgga
acatcgtttgtgaatgagatggggattataatttacgaccttcaaggactctatcgtaca
ttcttctccgcccaaactgccctagttgcggaccatggaacagatgccatggagaggcag
gaggcacggtatttaaggctagcgaagcgggagatcttgcgaattttcgagtgctttgtt
gacaatacggaagaatgtgactttgtggcaacaaattgcatgccgagtattctgacaact
gttcttgaggactaccgtgactcgcttcccatagtgaaggaggcaggagccctagctctt
gtgacggcgtgtgtcaacaagttgggcacgcggttggccggggattgtgctgccattttg
gaccacacgtttgatacaaccatatcgatgatctgcgcaaacgctgaggattttcccgag
tttcgcgtgaatcttttcaaactgctacacgcactgaatactcgctgtttttccaatttc
ttgagctacgcctccactaagggggacgttataaacggtatgctgtgggtaatcaaacat
acagattttgctataatggagacggggttgaagactttagatgctttccttgagaatgtc
tcccggtcagagttacttcaacccttctacgatgcctttatgcagcaaatatttgtcgag
gttttggtgtccgctatggattcgcttcatgccgcaggattcgaactgcattgtagcatc
ctcatcaaactcttcactgtgtctagcatgtttcccgtagatttgccaaagctcggccga
aacgatattgagagctttctttgtgagaacctttcaaccattgccacactcacacctgtc
cttattaagcagtttattgctggagcgtatgaaaagtatggagaccctgtcgaattcagg
cggagctttgcagatttcctcatagaaatgcaggtttggggtgctgaggaggaaaacaga
ctgcaacaagaggaagaacaacgcagacgggaggaagatattccgggatttgctgccctt
tccgtgaaggggccgccaccaacaccttctttttatccctga
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integrated database retrieval system