KEGG   Trypanosoma brucei brucei: Tb11.01.6090
Entry
Tb11.01.6090      CDS       T01013                                 
Name
(RefSeq) RNA polymerase-like protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03020  RNA polymerase
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tb11.01.6090
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tb11.01.6090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb11.01.6090
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb11.01.6090
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb11.01.6090
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Tb11.01.6090
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Tb11.01.6090
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tb11.01.6090
SSDB
Motif
Pfam: SHS2_Rpb7-N PutA_N
Other DBs
NCBI-GeneID: 3665325
NCBI-ProteinID: XP_829505
UniProt: Q381Y8
LinkDB
Position
11
AA seq 190 aa
MFYKMKLERNIKVEPHLLERTLHRHLEEYLRKAVEGTPLHLSLGNALRSGLARTNQNSSA
VIIAVLDILNTSSLEGRVLDDGSVSFFVKYEGLVFKLHRGEVIDVIVSSVEREGWWGDVM
GVGRMYISRGQMGNEWVYESDGMRGIWITKDGARSVKEGEIVRVRVVAETPQSEGVLAVG
SMVGNYLGPL
NT seq 573 nt   +upstreamnt  +downstreamnt
atgttctacaaaatgaaattggagaggaatataaaagtggagcctcatcttctagagcgg
accttacaccgccatcttgaagagtaccttcgtaaggcggttgaggggacgccgctgcac
ctatcgctaggaaatgcgttgcgaagtggtttggcccgcacaaatcagaattcttcggcg
gtcattattgccgtcctcgacatattaaacacaagttcgctggaaggaagggtgttggat
gacgggagcgtgtccttcttcgtgaagtacgaggggcttgtgtttaaacttcaccgtggt
gaggtaattgacgtgatagtcagtagtgtggagcgtgagggctggtggggtgacgtaatg
ggcgtcgggcgcatgtacattagtcgtggacaaatgggcaatgagtgggtttacgaaagt
gatggtatgaggggtatttggatcacaaaagatggcgcacggtccgtaaaggagggggaa
attgttcgcgtacgtgtggttgcggagacaccacagtcggaaggcgtactggcagttggt
tcgatggtagggaattatttaggaccactgtag

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