Trypanosoma brucei brucei: Tb11.01.6090
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Entry
Tb11.01.6090 CDS
T01013
Name
(RefSeq) RNA polymerase-like protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03020
RNA polymerase
tbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tb11.01.6090
09124 Replication and repair
03420 Nucleotide excision repair
Tb11.01.6090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb11.01.6090
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb11.01.6090
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb11.01.6090
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
Tb11.01.6090
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Tb11.01.6090
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Tb11.01.6090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
PutA_N
Motif
Other DBs
NCBI-GeneID:
3665325
NCBI-ProteinID:
XP_829505
UniProt:
Q381Y8
LinkDB
All DBs
Position
11
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AA seq
190 aa
AA seq
DB search
MFYKMKLERNIKVEPHLLERTLHRHLEEYLRKAVEGTPLHLSLGNALRSGLARTNQNSSA
VIIAVLDILNTSSLEGRVLDDGSVSFFVKYEGLVFKLHRGEVIDVIVSSVEREGWWGDVM
GVGRMYISRGQMGNEWVYESDGMRGIWITKDGARSVKEGEIVRVRVVAETPQSEGVLAVG
SMVGNYLGPL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgttctacaaaatgaaattggagaggaatataaaagtggagcctcatcttctagagcgg
accttacaccgccatcttgaagagtaccttcgtaaggcggttgaggggacgccgctgcac
ctatcgctaggaaatgcgttgcgaagtggtttggcccgcacaaatcagaattcttcggcg
gtcattattgccgtcctcgacatattaaacacaagttcgctggaaggaagggtgttggat
gacgggagcgtgtccttcttcgtgaagtacgaggggcttgtgtttaaacttcaccgtggt
gaggtaattgacgtgatagtcagtagtgtggagcgtgagggctggtggggtgacgtaatg
ggcgtcgggcgcatgtacattagtcgtggacaaatgggcaatgagtgggtttacgaaagt
gatggtatgaggggtatttggatcacaaaagatggcgcacggtccgtaaaggagggggaa
attgttcgcgtacgtgtggttgcggagacaccacagtcggaaggcgtactggcagttggt
tcgatggtagggaattatttaggaccactgtag
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