Trypanosoma brucei brucei: Tb11.01.7950
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Entry
Tb11.01.7950 CDS
T01013
Name
(RefSeq) DNA repair helicase and transcription factor protein, putative
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03022
Basal transcription factors
tbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tb11.01.7950
09124 Replication and repair
03420 Nucleotide excision repair
Tb11.01.7950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb11.01.7950
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb11.01.7950
Enzymes [BR:
tbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tb11.01.7950
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Tb11.01.7950
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Tb11.01.7950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
Helicase_C_3
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
3664517
NCBI-ProteinID:
XP_829684
UniProt:
Q381F9
LinkDB
All DBs
Position
11
Genome browser
AA seq
777 aa
AA seq
DB search
MQCLFLEERIKKEGCVVLFAEAFRPSFANIQGFLTTIAEPVSRLSLMHEYRMTYFSLGAA
ASASISVSEVIQFLDDHVYFFRDKCFASYRESVCAFAEMYMSRCNLARVVIDESRTLLEC
KDIVTAKTLLKDRVVRSLCCQPKETVGEDACPHFLLKSRAAARVVAERCVLLGYPLQQQY
EYEKDTSIRNVNIALKSQTRPRPYQIAAVDAAASDGALRSGCIVLPCGSGKTLVGIMLLC
KVKKPTLILCAGGVSVEQWRNQILEFASVCAPANNEEGDPSNSTTGEKVRTAAVGAARIS
CLTGKQKDEITDETDIVLTTYSMLVTAHKAQARCQVEGFEMNADGRGRNPRRANPKERLF
QPYGLLIMDEVHMMPADAYKDSLGFINAKGVVGLTATYVREDSKIRDLFHLVGPKLFDIS
WERLASSGYLAHVTCIEVLTPLARRFSLEYLERSSELTSPQHGTPLLVMLAAANPNKMLC
VMEIVKRHVAESSKILVFCDHIMLLKEYSKLLGAPVVCGDTPHRERLMIFSDFQSTSKVN
VVCLSRVGDVSVNLPSANVVVQVSSHGGSRRQEAQRLGRILRPKEKASNGKPTDAWFYTV
ISTDTVEMSYAAHRTAFLVDQGYTCSVTEFNPDGAPEAAVEGVDDTAPGDVVSIRQAKLR
GTFKKQELKCSVASPTAQGSVNPRSLDYQEKLLCRVVASWELDYQNATSQQNEPGVANDT
ATGLIDKKMKRARDETAEDIKREWNSGAQTTQPRGDFCRLPLQRLVGANDDVVYHES
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcctgttcttggaggagagaatcaagaaggaaggttgtgttgtgttgtttgcc
gaggcattccgaccttcgttcgctaacattcaggggtttctcacaactatcgcagagccc
gtttcacgactttctctgatgcacgaataccgtatgacatacttttcactgggcgcggct
gcctccgccagcatatcggtgtcagaagtaattcagttcttggacgaccacgtttacttt
tttcgcgataaatgttttgcttcctaccgagagagtgtttgtgcctttgctgagatgtat
atgagtcggtgtaacttggcacgtgtagtcatagatgagtcgcgaacgttgctggaatgt
aaggatattgtaacggcaaaaacattgttaaaggaccgagtcgtgcgatccctctgttgc
caacccaaggaaaccgttggtgaggatgcgtgcccccatttccttcttaagagtcgcgcc
gcggcgagggtggtggccgagcgctgcgttctgcttggctacccgctacaacaacaatac
gagtatgagaaggatacaagcattcgtaacgttaacattgcgttgaagtctcaaactagg
cctcgcccataccagatcgctgctgttgacgccgcggcgagcgatggtgctttgcgcagt
ggttgtatagttcttccctgtggatctggtaagacacttgtcggtatcatgctcctttgt
aaggtaaagaaaccaacactcatactttgcgcagggggcgtgagtgttgagcagtggaga
aaccagattttagagttcgcaagcgtttgtgcccccgcaaacaatgaagagggcgatccg
tcgaatagtaccactggcgagaaggtgcggacagcagcagttggggctgcacgcatctca
tgtctgaccggaaagcagaaggatgagatcacggatgagacggatattgtgctgacgacg
tacagtatgctggtgactgcgcataaggcccaggcgcgctgccaagtggagggcttcgaa
atgaacgctgatggacggggaagaaacccccggagggccaatcctaaggagcggctgttc
caaccgtacggtcttcttatcatggatgaagtgcacatgatgcctgcggatgcgtacaag
gatagcttgggtttcatcaacgctaaaggcgttgtggggctgacggcaacgtatgtgcgg
gaggattccaaaatacgtgacctttttcatttggtaggaccaaagttgtttgacatttcg
tgggaaagactggcgagtagtggttatttagctcacgtgacctgcatcgaggtgctgacg
ccgctggcgcgccgcttcagtcttgagtaccttgagcgcagcagcgagcttacatcgcca
caacacggtacaccgcttctcgtgatgcttgcggctgctaaccccaacaagatgctgtgc
gttatggagatcgtcaagagacatgtcgccgagtcctcgaagattctcgttttctgtgac
cacatcatgctactgaaggaatacagcaagcttctcggtgcacctgtggtttgcggggat
acgcctcatcgggagcgcctgatgatattctctgactttcagagtacctcgaaggtaaac
gttgtttgcctgtcgcgtgtaggagatgttagtgtaaaccttccaagcgcgaatgttgtg
gtgcaggtatccagtcacggtggaagcagacggcaagaggcacagcgcctcgggaggatt
ctgcgccccaaagaaaaagcgagcaatggcaaacccaccgacgcttggttttacactgtg
atcagcacagacaccgttgagatgtcgtacgcagcacaccgaactgcattcctcgtggat
cagggctacacgtgtagtgtcacggagtttaaccctgacggcgctccggaggctgctgtg
gagggggtagatgacacggcaccgggtgatgttgttagtattcgtcaggcgaaactccgt
ggcaccttcaagaaacaagaactaaaatgcagtgttgcttcacccactgcacagggatct
gtcaatccacgtagtctggactaccaggagaagcttctttgccgtgtggttgcgagttgg
gagttggattaccaaaatgcaacgtcacagcagaatgagccaggtgtggcaaatgacaca
gcaactggtttgatagacaagaaaatgaagagggcgagagacgaaaccgctgaggatatc
aagcgcgagtggaactcgggcgctcagacgacgcaaccacgtggggacttttgtcgcttg
ccgctgcaaaggttagtaggcgctaacgatgacgttgtctatcatgagagttag
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