KEGG   Trypanosoma brucei brucei: Tb11.02.1930
Entry
Tb11.02.1930      CDS       T01013                                 
Name
(RefSeq) ATP-dependent RNA helicase, putative
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
tbr  Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb11.02.1930
Enzymes [BR:tbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Tb11.02.1930
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Tb11.02.1930
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH ResIII Helicase_C AAA_22 AAA_19 AAA_30 SWI2_SNF2 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 3664334
NCBI-ProteinID: XP_828514
UniProt: Q385X9
LinkDB
Position
11
AA seq 2196 aa
MKSNIKDKKTPLTLSLGKHLSLRFFFGGTSLAAHARLCQADRRESMSHRGSCMQCGSFDE
GAEDPRDRQWYCNTCWAAYNDSRKKGRWENREGCDDRRNNIGANHRRRNPNAGSRGATET
AGAKGGSKAVDKQHRNKAEEPERKGSAASPSWYHSAQDAVRRLESVLGSFAPFRQDYRHH
LMPDATSLLDDLQMLQVAEKSSFSNREGEVRRQHTCSFVGQFMQRHQSITVIAHTGEPLS
PRGNRVGGVSRSAYLENNKVSLDLLLSSVDDIVSQVYVRFDEDMTRIILNALDRVTACET
QKQRDAVRVRAIEELLQVLGVEHCELIQCVMHRPRDIFLRLLEEFCTLDGGNDGGTTGDS
AAPDHRGLTVRFVKTAKQRSVLREAEFDRRGSADEQWLAHMTQRYRQLVRESELDEFFKR
DLSINGSCPSFASGATVLQKEDHIRVHVPPPERKVLPEEDRVCIATSLPEWTHAAFLNIT
HLNTIQTSLFRTAFHTSQNMLVCAPTGAGKTVCGLLVMLRCIEEQRVDGVLDRNFKIIFI
APMKALAQEMVENFSRRLAPFAMEVRELTGDMQLTKRELAQTQVIVTTPEKWDVITRKQA
NEELTTQVRLIIIDEIHLLNEDRGPVLEAIVARTLRQGELASEQKHRTRLVGLSATLPNY
KDVANFLRVDLAEGLKVFGAEYRPVPLEQSFIGLRMGLKDKERRMDQLAYEEVVRNVREG
HQVMVFVHSRKQTVALARFFMEEANVRGHEALFKQDETVPKEAQKLGCSLQGRDLSNLFA
AGFGAHHAGLIRYDRTSTENLFRKGFIRVLVCTSTLAWGVNLPAHSVMIRGTHIYDPKRG
GLVSMSVLDVMQIFGRAGRPQYDTSGHGTIISDEKEVGRYLRLLACALPIESKLQEGLCD
HLNAEIHAGTISSIVEGSGWLEYTYLWQRLRVNPLMYGLKVSDARQDPKLKKIRYEIVSK
AAEELADAGMIRYNPQTGAVDTTDLGRIASHYYISYKSIATFNTKMRRPDESWIDSLDLG
AAMNVVACADEFSQLRVRQEELDELKKLHALLPRQVQHYGIVGESADETSVEWKVTTLMK
SYISRINVDMHSLASDVNYVVQNAPRISRSLFEIEMQRGHPLTTAVFLSLCKCLEQRRWE
FEHPLLQFGVDMTDAVYRNIEKKRPSMSLLQEMSASDIGSLVQNQRFGDVIARLVASFPT
VSLAVDIQPITCTILRVKVTISATFSWNSRYHGSVEPFWLLVEDQDNHFIFHHELISLKR
KEVEAGLPQVVNLSVPIVAEYDMYSVRLYSDRWLGSQEEYSFSIGHLHLPDDSQKTTPLL
PLAPLRREVIPEKYHTIYESFREFNPVQTQVFHAMYHTDSSIFLGAPTGSGKTIAAEMSI
LRLFEKYPVGSKVVYIAPLKALVKERVKDWMARFSRRLGRRVLELSGDVTPDITALVQAD
ILCTTPEKWDGLSRSWQVRRYVTAVRLVIFDEIHMLGSDRGPILEVIVSRMRFIGWHRNA
PIRLIGLSTAVANPADLTSWLGVSHKWAVFNFDPSVRPVPMRVHIAGYHGRNYCPRMAAM
NKPVYNAICEKSPNKPVIVFVSSRRQTRLTAMALIGFLVMEQNTAKFVRMDVEEVNAYVA
KVSDPYVKHCMQFGVGVHHAGLLEGDRTVVESAFLKGKLQVLVATSTLAWGVNFPAHMVV
VKGTEYYDGKTKTYVDFPITDVLQMIGRAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDPF
PVESALHRQLHTHINAEIVSGTIKTRQDAVDYLTWTYMFRRIVKNPSYYGLSDRSPASVT
IFMSTLVANVLDELEQCGCIEHCQSDGCDADADPNALTYTVLGKLCSYYYLSHKTVYYFD
TNINENSTHVDVLKALCEADEFEELPVRHNEDKLNLTLSQALPLPIKANNADSPHVKAFL
LFQAHFERCNLPISDYYTDQKSTLDNAMRVVQAMVDITANNGHLHTSLRCMSLLQCIVQG
LWWHSNTLLQIPHVTDTMLPIIAEHCAGLHHVSQLVNSPLSALTKLHETLCDHCGLGDKE
VREAMEAVRSFPLIDVHIRLSRTVVDDGHATEEVMVKRGDGMDDDEEGDGYELTAYLTRL
STPIRHVVAPHFTKSKDEQYWLVIGSEHTGELIAMKRVGRLMGNATTATTLRFDWDDDWT
SFAENGSVPLSLYVVCDSYVGLDQQYNFRVSVPSRE
NT seq 6591 nt   +upstreamnt  +downstreamnt
atgaaaagcaatatcaaagacaaaaagacccccttaactctatctttaggaaaacatctt
tctttaaggtttttttttgggggcacctcattagctgctcacgcacgcctctgtcaggcc
gacaggcgggagagcatgtcccaccgcggctcgtgcatgcaatgtgggtcattcgacgag
ggggctgaagatccacgcgacagacagtggtattgtaacacctgttgggcggcttataac
gacagcagaaagaagggccgatgggaaaacagagagggatgtgacgataggcgcaacaac
attggagcaaaccataggagacgtaaccctaatgccggtagccgaggcgccacggaaact
gctggggctaagggcgggtctaaagctgtggacaagcaacatcgaaacaaggcagaggaa
cctgaacggaagggctccgcagcgtcaccgagctggtatcatagtgctcaagatgctgtc
cggcggttggaaagcgtgcttgggagttttgcaccatttcgtcaggactatcgtcaccat
ctcatgcctgacgcaacgagtcttttagatgatttacagatgctacaggtagctgagaaa
tcatccttcagtaaccgcgaaggtgaggtacgtcgacaacatacgtgctcatttgttggg
cagtttatgcagcgacatcaatcaataacagtgattgcgcatacgggagagcctctttcc
ccccgtggcaatcgtgttggtggagtgagccgctctgcgtacctggagaataataaagta
tcgctggatttgttgttatcaagtgtcgatgacattgtgtcccaggtgtacgttcgtttc
gacgaggacatgacacggattatccttaatgcgcttgacagagtgacggcttgcgaaacg
cagaagcagcgggatgcggtccgagtgcgtgctatagaagaactgttgcaggtgctcggc
gtggagcactgtgagttgattcagtgcgtgatgcaccgtccacgcgacatcttcctacgt
cttttagaggagttctgtactctcgacggagggaacgatggtggtactaccggtgattcg
gcggctccagaccaccgtggcctcacagtacgttttgtgaaaacagcaaaacagcgttcg
gtgttgcgagaggctgagtttgaccgtcgtggtagtgcggacgaacagtggcttgctcac
atgacacagcgttaccgacaactcgtacgtgaatcggagctggacgagtttttcaagcgt
gatttaagcattaacgggtcttgcccttcctttgcctctggtgccacggttctccagaaa
gaagatcacattcgggtccacgtgccgccaccagagcgcaaggtgctaccagaggaggat
cgtgtttgcattgctacatcgcttccggagtggactcacgcggcatttttgaatatcacc
catcttaataccatacagacctccctgtttaggaccgcctttcacacatcgcaaaacatg
ctcgtgtgcgcacctacgggggctggtaaaaccgtctgcgggctactggtgatgttacgc
tgcattgaagaacaacgtgttgacggtgtgttggatcgaaacttcaagataattttcatc
gcccccatgaaggcccttgcgcaggaaatggtggaaaacttctcccgtcgactggctcct
tttgcgatggaggttcgtgaacttacgggtgacatgcaacttacgaagcgggaactcgcg
caaactcaggtgattgtaacaaccccggagaagtgggatgtcatcacgaggaagcaggct
aacgaggagctcactacgcaagtgaggcttattatcattgacgaaatacatctgctgaac
gaggaccgtgggccggtgctagaggctattgttgctcgcacgcttcgccaaggcgagctc
gcttcagagcagaaacaccgtacccgtctagtcggcctttccgcaacgttaccgaactat
aaggacgtagcaaattttttgcgagtggatcttgccgagggattaaaggtgtttggggca
gagtaccggcccgtgccgttggagcagtctttcatcggtcttcgtatgggtttaaaggac
aaggaacgccgtatggaccaacttgcctacgaggaagtcgtccgcaacgtacgggagggt
catcaggttatggttttcgtgcactcacgcaagcaaactgttgcactggctcgctttttt
atggaggaggcaaatgttcgtggacatgaggccctctttaaacaggacgaaacggtaccc
aaagaggcacagaagctgggttgcagcctgcaggggagagatctttctaatctttttgcc
gcggggtttggtgctcatcacgctggtctaatccgttacgatcgcacgtccacggaaaac
ttgtttcgtaaggggtttataagggtgcttgtatgcaccagcacgcttgcttggggagtg
aacctgcctgcccactcggtgatgattcggggaactcatatctacgacccgaagcgcggt
ggtcttgtgtccatgtcggtgcttgacgtaatgcaaatatttggccgagcggggagaccg
cagtatgatactagtggtcacggtaccatcatatcagatgagaaggaggttggtcgctat
ctccgtttactagcttgcgccctgcccatagaaagcaagttgcaggaagggttgtgtgat
cacctcaatgcggagatacacgccgggacgatatcatccattgtggagggttccggatgg
ttggaatacacgtatttgtggcagcgcctacgggtaaatccgctgatgtacggtttgaag
gtatcggatgcgcggcaggacccaaagttgaagaaaatacgctatgaaattgtcagcaag
gcagctgaagagttggcggatgccggtatgatacgctacaacccccaaacaggtgctgtg
gacaccaccgatttggggcgtatcgcgagccattattacatctcttacaaatctatcgct
acgtttaacacaaaaatgcggcgaccggatgagtcatggattgacagccttgatcttgga
gctgcaatgaacgtcgtagcgtgtgctgatgaattttctcagctgcgtgtccgccaagaa
gagctcgatgaactcaagaaattgcacgctttactgcctagacaggtgcaacactacggt
attgtgggtgaaagtgccgacgaaacatctgtagagtggaaggtaacgacactcatgaag
tcttacattagtcgcatcaatgttgacatgcattcccttgcatccgatgtgaattatgtt
gtacagaatgctcctcgcatatcacgatctctattcgagatcgaaatgcagcgcggccat
ccactcacaactgccgttttcctttcgctgtgcaagtgcttggagcaacgtcgctgggag
tttgagcaccctcttttgcagtttggcgtggacatgacagatgctgtttaccgaaatatt
gaaaagaagcggcccagtatgtcccttctccaggaaatgtcagcaagtgacataggttct
ctggttcagaatcagcgttttggtgatgtgattgctcgactcgttgcttccttccccaca
gtctcacttgcggttgacattcaacccattacatgtactattctccgtgttaaggtgaca
atctctgcaacgttctcgtggaatagtcgatatcacggctccgtggaaccattttggtta
ctggttgaagatcaggacaaccacttcattttccatcacgagcttatctcgttaaaacgt
aaagaggtggaggctggcctgccacaggtcgtgaatctctctgttccaatcgtagccgag
tatgatatgtattccgttcggctttacagcgaccggtggctcggttctcaggaggaatac
tccttttctattggccatctgcacctacctgatgactctcagaaaacgacacccctgctt
cctcttgcgccgcttcgccgtgaggtgataccggagaagtaccataccatctatgagagt
ttccgggagtttaaccctgtacagacgcaagtgtttcacgccatgtatcacaccgacagc
agcatcttccttggagctccaaccggaagcggaaagactattgctgctgaaatgtctata
ctacgccttttcgagaaatatccagtaggatctaaggttgtgtacatagcgccgcttaag
gcgctggtaaaagagcgggtgaaggactggatggcccgtttttctcggcgcttgggccgg
cgtgtcttggaattatctggcgatgttacacctgatatcactgcacttgtgcaggcagac
atactgtgcacaactccagagaaatgggacgggctttcacggagttggcaggtaaggcgc
tacgtcacagcagtgcggcttgtaatttttgatgaaatacacatgcttgggtccgaccgt
ggtcctattcttgaagtgattgtaagtcgtatgcgctttattggttggcatcgcaatgct
cctattcgtctcattggcctttctactgctgtcgctaatcccgcagatcttacttcgtgg
ttgggcgtttcgcacaagtgggcagtgttcaacttcgacccgtcggtgaggccggtgccc
atgcgggtacatattgcggggtatcatggcaggaattactgtcctcgaatggcggctatg
aataagcctgtttacaacgccatctgcgagaagagcccaaacaagcccgtcattgttttt
gtttcctcccgtcggcaaacgaggcttacggcaatggcactaatcggttttctggtgatg
gaacagaatactgccaagtttgtacgtatggatgtggaagaggtcaacgcgtacgtggca
aaagtaagcgacccatacgtaaagcactgcatgcagtttggcgttggtgtgcaccacgcc
ggtttgctggagggtgatcgcacggtggtggagtccgcttttctcaagggcaagctacag
gttctagtggcaacctccacacttgcgtggggagtcaacttccccgcacatatggtggtt
gtgaagggtacggagtattatgacgggaagacaaaaacatatgtggacttcccaattact
gacgtactacagatgattggccgtgcgggaaggcctcagttcgatacggagggtgtggcg
caggtgctttgtcacgagccgaagaagggtttctaccgaaaatttctctacgaccctttc
ccagttgagagcgcacttcacagacaactacacactcacatcaatgctgaaatcgtgtca
ggaacgattaagacccggcaagacgctgtagactacttgacgtggacctatatgtttcgt
cgtatcgtgaagaatccgtcgtattatggactttcggatcggtcaccagcgtcggtaacg
atctttatgtccacccttgtcgccaacgttcttgacgaacttgagcagtgtggatgtatc
gagcattgccaaagcgatgggtgcgacgcagatgctgatcccaatgcgttgacttacact
gtgcttggcaagctgtgttcttactactatctttcacataaaacagtttattacttcgat
acaaatatcaatgaaaatagcacccacgtggatgtcctgaaggcactatgtgaagcggat
gagtttgaagaacttcccgtgaggcacaatgaagacaaactgaatcttactttgagccaa
gcccttccactccccatcaaagcaaacaatgcggactctccgcacgtgaaagcgtttctt
ctcttccaggctcactttgagcgttgcaacctgccaatatccgactactacaccgatcaa
aaatcgaccctcgacaacgccatgcgtgttgtgcaggcgatggttgacataacagcaaat
aatggccacttacacacgtcgctccgctgtatgtctctcttacagtgtattgtgcaagga
ttgtggtggcactccaacacactgttgcagatacctcacgtgaccgacacgatgcttcct
attattgcggagcactgtgccggactccatcacgtatcacaattggtgaacagtccactg
tcggcccttacgaaactccatgagaccttgtgcgaccactgtggtcttggggacaaggag
gtccgcgaagcgatggaggcggtgcgcagctttccattgatcgatgtgcatatacgcctg
tctcgtacggtcgttgatgatggtcacgcaactgaagaggtgatggtcaagagaggtgat
gggatggacgatgacgaagagggggatggttatgagctgacggcgtacctcacaaggctt
tccacgcctattcggcatgttgtcgcaccccactttactaaatcgaaggatgagcagtac
tggttggttattggaagtgagcatacaggagagttgattgctatgaagcgtgtgggccgc
ttgatgggtaatgccacaacagcgacaacacttcgatttgattgggacgacgattggacc
tcttttgcagaaaacggctcggtgccccttagtctgtacgttgtatgtgattcctacgtt
gggctagatcagcagtacaactttagggtctcggtcccatctcgcgagtga

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