Trypanosoma brucei brucei: Tb927.2.1800
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Entry
Tb927.2.1800 CDS
T01013
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03030
DNA replication
tbr03410
Base excision repair
tbr03420
Nucleotide excision repair
tbr03430
Mismatch repair
tbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tb927.2.1800
03410 Base excision repair
Tb927.2.1800
03420 Nucleotide excision repair
Tb927.2.1800
03430 Mismatch repair
Tb927.2.1800
03440 Homologous recombination
Tb927.2.1800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbr03032
]
Tb927.2.1800
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb927.2.1800
Enzymes [BR:
tbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tb927.2.1800
DNA replication proteins [BR:
tbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Tb927.2.1800
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Tb927.2.1800
MMR (mismatch excision repair)
DNA polymerase delta complex
Tb927.2.1800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
POL3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
3655472
NCBI-ProteinID:
XP_951513
UniProt:
Q585S7
LinkDB
All DBs
Position
2:331701..334781
Genome browser
AA seq
1026 aa
AA seq
DB search
MTDSPDLSRPPVPPDYLQSDLLFQLLDCCQTQGSPHGIVSTVKHEDVPIVRIYGVTKEGH
SVLVHCYNFEPHLWIRAPNRWLDVYSKTFVQELNASLDPLTHVSNTVVRIERHKRRSLMY
YNPDGECDYLKVIVQLPQHIPRLRTLLSSGVMCVGAWEGLRAFPTFESNVIFPLRFMVDG
NIGGCNWITVPAGQFHLFSPRTSTCQIEVCCSHEVLQSHEAVGDYLLIAPFRILSIDIEC
EGRKGLFPEAERDPVIQIANHCVNYGKEEDALTRTIFTLKSCGAIAGANVCSFETEEEML
VQWARFVKRIDPDFLTGYNICNFDFPYLLSRGITLKVNDSFFYWGRQLNERTVHREKKFL
SRQLGNREYTELTMEGRVVMDVMAVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIISDL
QQGNDETRRRLAVYCLKDAYLPVKLLERLMVVVNNVEMARVTGVPIGWLLERGQQIKVFS
MLLRKARARNFVVPTVETTGAEQRRYEGATVIEPKKGHYIEPIVTLDFASLYPSIIIAHN
LCYSTLLPGHEVNNYESGMKEDTPTEHKFIRKEVFPGVLPEVLRDLLAARRQARALMKDV
SQDSLEYKVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSATVTSYGRRMIEETKQFVE
KKYVGAEVIYGDTDSVMIRCVINADESDTNKLQQAMDFGKEAAEAVSSTFPDPIRLEFEK
VYYPFLLMNKKRYAGLLWTNTVRYDKLDAKGIETVRRDSCPLVASVISGVLNRMLIQRSV
ESAVEFVKGTIRDLLHNRLDISQLVITKSFSKSESEYAGAQAHIALVERMRRRDPASAPN
VGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPIDTQHYLEHQLGPPLLRVFEGVLQDP
SVLTKGDHTRYVSVSAPNRNAGGLMKFVKFQLQCISCRSVIQEGALCDACSVMGPDIYGK
IVAKRNHYEAVYSQVWTQCQQCQGSLNQEVICTSRDCPVFYLRKKVQKDVHEQQTLLDRF
GVVDDW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcacctgatctctctcgcccacctgtgccacccgattaccttcagagcgac
ttactctttcaactgctcgactgctgtcaaactcaaggcagtccccatggcatagtttca
actgttaaacacgaggatgtcccaatcgtgcgtatttacggcgtgaccaaggagggtcac
agtgttcttgtacactgctacaactttgaaccccatctgtggattcgtgcccccaatcgg
tggcttgacgtatactcgaaaacgttcgtgcaagagttaaacgctagtttggacccgcta
actcacgtgtccaacacagtggtgcgcatcgagaggcacaagcgcaggagcctcatgtat
tacaatccggatggtgaatgtgattaccttaaggttattgttcagctcccacagcacatt
ccaaggttgcgcacgcttctttcctctggcgtgatgtgtgtcggtgcgtgggaagggcta
cgtgcgtttccgacatttgaaagcaacgtcattttcccgttgcgctttatggtagatggc
aatattggaggttgcaactggattactgtcccagcgggccagtttcacctgttcagccca
cgtacttcgacttgtcagattgaggtctgttgttctcatgaagtgctgcagagtcacgaa
gcggttggagattaccttttaattgctcccttcaggatcctttctattgatattgaatgt
gaggggagaaaaggcctctttcctgaggctgagagggaccctgttattcaaatcgctaat
cactgcgtcaattacggcaaggaggaggatgctcttacgcgaactatcttcacgctcaag
agttgtggagctattgccggtgctaatgtgtgctcgtttgagactgaagaagagatgctc
gtgcaatgggctcgcttcgtcaagagaattgaccccgattttctcactggctataacata
tgcaatttcgatttcccgtatcttctttcccgtggaatcacgctgaaggtgaatgacagc
tttttctactgggggaggcaactcaacgagcggacagtgcatcgtgaaaagaagttcctc
tcacgacaactggggaatcgtgaatatacggaattgacgatggagggccgtgttgtcatg
gacgtgatggctgtcatacagcgtgactataagctgcgcgcctactctctcaatgctgtc
tcgcaacacttcctgggggagcagaaggaggacgttcaccactccatcatttcggatctt
cagcagggaaatgatgagacacggcggcgcctggcagtgtattgcctaaaagatgcctat
ttaccggttaagcttttagaacgactgatggttgtggtaaataatgtggagatggcccgt
gtgacgggtgtaccgattggttggctactggaacgcggtcaacaaattaaggttttctcc
atgttgttgcgtaaggcgcgggcaagaaattttgtggtccccacggtggaaactacagga
gctgaacagcgtcgttacgaaggcgctaccgtcatcgagcctaagaaggggcactacatt
gagccaattgttacattggactttgcctcactctacccttccatcatcattgctcacaac
ttgtgttactcaacgctgcttcctgggcatgaggtgaacaattacgagtcagggatgaag
gaagacacccccacggaacacaagtttatccggaaggaggttttccccggtgtgttgccc
gaagtcctgcgggatctgcttgccgctcgaaggcaggcccgagcgctaatgaaggatgtt
tcgcaggactctcttgaatacaaggttcttaacggccgtcagctggcgctgaaggtgagc
gctaattctgtctacggattcactggcgcccaggtgggtaggttgccgtgtttagagttg
agtgcgactgtgacgagctacgggcgaaggatgattgaggagacaaagcagttcgtagag
aagaaatacgtgggagcggaggtgatttatggtgatactgactctgttatgattcgatgc
gttataaatgccgatgaaagtgacaccaataaattgcaacaggcgatggattttggaaag
gaagctgcggaggctgtgtccagcacctttccggaccccatcaggttggaattcgaaaaa
gtgtactaccctttcttactaatgaataagaagcgctacgctgggttgctatggaccaac
accgtgcggtacgacaagttggatgcaaagggaatagagaccgttcgtcgggacagttgc
ccgcttgtcgccagcgtcatctccggagtgcttaaccgaatgctgattcagcgctccgta
gagagtgcggtggagtttgtgaagggaacgattcgcgatctcctacataaccgactcgac
atctcgcagctggtcatcacgaagtctttctccaagtctgagtccgagtacgctggagca
caggcccatattgccctggtggagcgcatgcgaaggcgagaccccgcttctgccccgaac
gttggtgaccgcgtggcgtatgtgattgtccgcgccgccaagggggccaaggcgtatgag
cgcagtgaggatcccatatacgtgctggaaaacaacattcctatcgatacgcagcattac
cttgagcaccaactcgggcctccgctccttcgtgtttttgagggtgttcttcaggacccg
agcgtgttgacgaagggagatcacacgcggtacgtttctgtttcggctccgaacaggaac
gcaggggggctgatgaagtttgtgaagtttcaactccagtgcatttcttgtcgttctgta
atacaggaaggggccctgtgcgatgcgtgcagcgttatgggtcccgacatttatgggaag
attgtagcgaagcgcaatcactacgaggctgtttattcacaggtatggacacagtgccaa
caatgtcagggatcactgaatcaagaggtaatttgcacgagtagagattgccccgtgttt
tacctgaggaagaaagttcagaaagatgtgcatgagcagcaaacactcctggatcgcttc
ggtgtagtggacgattggtga
DBGET
integrated database retrieval system
