Trypanosoma brucei brucei: Tb927.3.1210
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Entry
Tb927.3.1210 CDS
T01013
Name
(RefSeq) protein transport protein Sec24C, putative
KO
K14007
protein transport protein SEC24
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tb927.3.1210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbr04131
]
Tb927.3.1210
Membrane trafficking [BR:
tbr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Tb927.3.1210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
3656054
NCBI-ProteinID:
XP_843715
UniProt:
Q57XV4
LinkDB
All DBs
Position
3:299855..302776
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AA seq
973 aa
AA seq
DB search
MSYPHNFDHQAPPLQQLQQQVPPPLPHGSWAPQPNQGPGVPFNGVGPGITGAYGAASASG
NAPTAQDWYYNQCPTSASGAPYSNGTNNFAYTPEMQYQPPHAQQQQQQQQLSYKIPSAAA
AQPSFPGLGATAASSPHTPATVGQYSEHPPAARHHDVSERNEHRGIPCQENLRSFPAPQS
RHSADSERQSTGPPPNYVRPPPRRAVDLVKAPNPNECVPPSSDSLMSNHSNLQFPSGADA
NISNASVKFFRPTMKWVPASANLVKDSRVPFGAVIAPLCQPVDPQEEVPCVSGYPPVRCQ
RCRAYVSCHARFTNMGRNWVCPLCSMCNDVSEEYFCNLDNQGQRLDKMQRPELSRGSVEF
DVDAYPEYALRNSDDAALEARPLHYLFLLDVSVKAATTFLSDYVDALLRSLHEMAVQYPE
CRVAFITYASTLHFYNVRHPRMPQMIVSDVCNPFVPLPFTSLCWLTLGTELDLVDAFLLR
VPEYASDLCETGCVLGAAVEVAKLVLSGQHGGRVIITAHKAPQNGIGAIKPREQHVLYGT
EKEKELLRPLDGYWQTIATTCAKEQISLDLHMFADEYCELVTLSHPCHVTNGRVHLFSNY
DSQTDAVELQAVLDQALLEEAGYAGILRVRCSTGLRVQRYHGHFFSQDKHDMDLVHVQGS
SSFYVEFAHESKPDSSSAAYFQTALLYTTRRGNRRVRVHSVRIPIASSISSIFDGDTVAV
LMAYIHQVISNSVNKGLKYAREQMHQQLLQLLTSYRRVVSQKSTSVLLMPGSLRLMPLYT
LCVLKSDAIAEGTTVRIDDRVQKLFHLLTVPTHQCLSYFYPTLYAMHSSMEETFCGAINP
ETGDCVMPPRKRLFYESITTDGVYILCDEQARSVYLWVGSAVTPEISLELFGTANSAEVG
RSVFFDHFGERLRNVLWACLNRDGRMRRLVILHQKDRGEEAFFKQLKEEGEGGTMSYDQL
LLKLHKAVGELAL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccacacaactttgaccaccaggcgccacctctacaacaactgcagcaacaa
gtacctcctccattaccacacgggtcgtgggctccgcagccaaaccagggtccaggtgta
ccatttaatggtgtgggtccggggataacgggagcttacggcgcggcaagtgcctcgggt
aacgcacctacggcacaggattggtactacaaccaatgccccacttcggcttccggtgca
ccttatagcaatgggacgaacaacttcgcctacacacccgagatgcagtaccaaccgccg
cacgcgcagcagcaacagcagcagcaacaactgtcgtataaaattccatcggcggcggca
gcccaaccatcattcccaggcctcggtgcgacggcggcaagttctccccacacgcccgct
accgttggtcaatattctgaacacccacctgccgcccggcaccacgacgtttcggaacgc
aacgagcatcggggaattccttgtcaggagaacttacgttcctttcctgcgcctcagtca
cggcatagtgcagattcagagagacagtccaccggccccccacctaattatgtgcgtcct
cctccgagacgcgctgtggacctcgttaaggcgcctaaccctaatgagtgtgtacctcct
tcctcggacagtctcatgtccaaccactctaacctccagtttccatctggtgcagatgcc
aacattagcaacgcaagcgtaaagttttttcgaccgacgatgaagtgggtgcccgcaagt
gccaatctcgtgaaggacagccgcgtgccatttggggctgtgattgcccctctttgccaa
cccgttgatccgcaggaagaggttccgtgtgtttccggttacccacccgttcggtgtcag
cgctgccgagcttatgtttcttgtcacgcgcgctttacaaacatgggtcgaaactgggtt
tgccctctctgcagtatgtgcaacgatgtgagcgaagagtacttctgcaacttagataat
cagggccagcggttggataagatgcagcgaccagaactttcacgggggagcgtggagttc
gacgtggatgcatatcctgagtatgcgttacggaacagcgatgatgcggctctcgaagct
agaccactgcattatctgtttctgttggatgtgtcggtaaaggcggcaacgacatttctg
tctgactatgtggatgctttactccgctcacttcacgagatggcagttcagtatcccgag
tgccgcgttgcctttatcacgtacgcatcaacgcttcacttctataatgtccgtcaccct
cgcatgccccaaatgattgtttcagacgtgtgcaacccgttcgtaccccttcccttcacg
agtctctgctggcttacactcggcactgagttagacttggtggatgcgttcttgttgcgt
gtaccggagtatgcgagtgacctctgtgagaccggctgcgtgctgggtgctgcggtggag
gtggcaaaactcgtgttgtccgggcagcatggtggtcgcgttattataaccgcgcataag
gcaccacaaaatgggatcggcgctatcaaaccgcgcgagcagcatgtcctatacggaacg
gaaaaggaaaaggaactgctgcgcccgctagacggatactggcagacgattgcaaccacg
tgtgcaaaggagcagatttcacttgatttgcacatgttcgccgatgaatattgcgaattg
gtgaccctctcacatccctgccacgtcacaaacggccgtgtacatctcttctccaactac
gatagtcaaactgacgccgttgaactgcaggctgtgcttgatcaggcgctgttagaggag
gccggttatgctggtatactgcgtgttcgctgcagcaccggtctgcgtgttcagaggtat
catggacatttcttctcccaagacaagcacgatatggatcttgttcacgttcagggctcc
tcctccttttatgttgaatttgcgcatgagtcgaagcctgatagcagttctgccgcatac
tttcaaaccgcgttactgtacaccacgcgtaggggcaatcgtcgggtgcgcgttcactca
gtgcgaataccgatagcttcgtctatttcatcaattttcgatggagacactgtggcagtc
ctgatggcgtacatacaccaggttatttctaattcggtgaacaaggggttgaaatacgct
agggaacagatgcatcagcaactgttacaactgttaactagctaccgccgtgttgtttca
cagaaatccacatcggtgctgcttatgcctggtagcctccgtcttatgccactctatacg
ctgtgtgtcctgaaatccgatgcaattgccgagggtactactgttcgtatcgacgaccgg
gtgcagaaactctttcacttacttactgttcccactcatcaatgcctttcgtacttttac
cccaccctttacgccatgcattcgtcgatggaggaaacgttctgtggggcgataaacccc
gagaccggtgactgcgttatgccaccgcggaaacgactgttctacgaaagtattacaact
gacggtgtgtacattctttgtgatgagcaggcacggtcggtgtacttgtgggttggctct
gctgtgacgcctgagatatctttggagttgttcggaacggcgaattcagcagaggtgggg
cgcagcgtattcttcgatcactttggggagcggctgcggaacgtactgtgggcttgcctg
aatcgtgatggacgcatgcggcgtttggtgattttgcatcaaaaggaccggggtgaggaa
gctttctttaagcaactgaaggaagaaggtgaaggaggaacgatgagttacgaccaacta
ctgttgaaactgcacaaagcggtgggcgagttggcgctatga
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