Trypanosoma brucei brucei: Tb927.3.1930
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Entry
Tb927.3.1930 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K12816
pre-mRNA-processing factor 17
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tb927.3.1930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbr03041
]
Tb927.3.1930
Spliceosome [BR:
tbr03041
]
Complex C
Other components
Step II factors
Tb927.3.1930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
3656128
NCBI-ProteinID:
XP_843787
UniProt:
Q57ZB8
LinkDB
All DBs
Position
3:complement(508342..509781)
Genome browser
AA seq
479 aa
AA seq
DB search
MLFDLAPHIDPKVLQRVAREKGYTLPVSEDSSEQRRQDASADLHAGLPLRFLATPEDVKR
AYLPPPEGFEEAYVKKTDGGGLPEKRTTQPVARKRVRSGEGPAQVGVSDSATPAVISAAG
ATEVNTNVSTSVAANTLQANFDPSFERTNYLGRSFLEPPPSLQPRSHECRLPRQMKGSCD
KHAAGIQQLQWLPPVGHLLFAADLKGEVRLYETFSSRRQCIASFVAHSQPVKSLEVTPDG
ETMSTGSVDGTVAMWDVEHGECRGVLTNSERLPCVQHLHHPLDPTSLILVALDRKVVLYD
VRVSYQKYQREYTGHMGTIFNLSLLSGGKKLLTTAEDKTLRTWDFRVPVQIKQIADVSMH
AITHVVRHPTEDMLVAQSLNNQALVFSDGGGGQVKLLRHRVFSGHTISGTRCQLAFSPDG
RYLSSGDINGKLFIWSWATGELLRSFSAHTQTLVSHRWHPVEASRVVTSAWDGAIKTWA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgaccttgcaccgcatattgatcccaaagtcctgcagcgtgtggctcgagag
aagggatatacgttgcccgtttccgaggatagttctgaacaacggaggcaagacgcgagc
gcagatctgcacgccggacttccgctgcgttttttagccaccccggaggatgtgaaacgg
gcatatttgcctccgccggaggggtttgaggaggcttatgtgaaaaaaactgatggcggc
ggattacctgagaagcgaaccactcagccagtggcgcgcaagcgggtacgaagtggtgaa
ggacccgcgcaggtgggggtctccgattcagccacacctgcggttatttctgctgctggt
gctacagaggtgaatactaacgtctccacctctgtagcggcaaatacacttcaagctaat
tttgatccatcatttgagcgcaccaattacttgggcaggtctttcttggagcctccccca
tcgctgcaaccgcgctcgcatgagtgccgtctcccacgacaaatgaaaggcagttgcgac
aagcatgcggcgggcattcaacagcttcagtggctacctcccgttggtcatttgttgttt
gccgctgatttaaagggtgaggtgaggctttacgagaccttctcttcccgccgtcagtgc
attgcttcatttgtagcccattcacaaccagtgaaatccctagaggtgactccggatggg
gaaacaatgtccacaggttctgttgatgggacggtagcgatgtgggacgttgaacatggt
gagtgccgaggcgtgctgacgaattcggagcggcttccctgcgtgcagcacctgcatcat
cctctagatccaacttccttaatacttgtagcactggacaggaaagtggtcctttatgac
gtgcgggtgagttaccagaagtaccaacgcgagtacacgggccatatggggaccattttt
aatctctcgctgcttagtggagggaagaaacttttaacgacagcggaggacaagacgctc
cgcacgtgggactttagggttccagttcaaatcaaacagattgcggatgtctctatgcat
gccatcactcatgtcgtgcggcaccccacagaagacatgcttgttgcccaatcgctcaac
aatcaagcacttgtattctctgatggtggtggaggacaagtgaagttacttcgtcatcgt
gtatttagcggccacacaatttcaggcacgcgttgtcaactggcatttagtcctgatggc
cgctatttgtcgagtggtgacatcaatggtaagttgtttatctggtcgtgggctactggt
gagctactacgatctttttcagcccacactcaaactcttgtgtcgcatcgctggcaccca
gttgaggcttcccgcgttgtcacctcagcgtgggatggtgccattaagacatgggcgtga
DBGET
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