KEGG   Trypanosoma brucei brucei: Tb927.3.1930
Entry
Tb927.3.1930      CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K12816  pre-mRNA-processing factor 17
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tb927.3.1930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tbr03041]
    Tb927.3.1930
Spliceosome [BR:tbr03041]
 Complex C
  Other components
   Step II factors
    Tb927.3.1930
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD_LRWD1 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 3656128
NCBI-ProteinID: XP_843787
UniProt: Q57ZB8
LinkDB
Position
3:complement(508342..509781)
AA seq 479 aa
MLFDLAPHIDPKVLQRVAREKGYTLPVSEDSSEQRRQDASADLHAGLPLRFLATPEDVKR
AYLPPPEGFEEAYVKKTDGGGLPEKRTTQPVARKRVRSGEGPAQVGVSDSATPAVISAAG
ATEVNTNVSTSVAANTLQANFDPSFERTNYLGRSFLEPPPSLQPRSHECRLPRQMKGSCD
KHAAGIQQLQWLPPVGHLLFAADLKGEVRLYETFSSRRQCIASFVAHSQPVKSLEVTPDG
ETMSTGSVDGTVAMWDVEHGECRGVLTNSERLPCVQHLHHPLDPTSLILVALDRKVVLYD
VRVSYQKYQREYTGHMGTIFNLSLLSGGKKLLTTAEDKTLRTWDFRVPVQIKQIADVSMH
AITHVVRHPTEDMLVAQSLNNQALVFSDGGGGQVKLLRHRVFSGHTISGTRCQLAFSPDG
RYLSSGDINGKLFIWSWATGELLRSFSAHTQTLVSHRWHPVEASRVVTSAWDGAIKTWA
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgctttttgaccttgcaccgcatattgatcccaaagtcctgcagcgtgtggctcgagag
aagggatatacgttgcccgtttccgaggatagttctgaacaacggaggcaagacgcgagc
gcagatctgcacgccggacttccgctgcgttttttagccaccccggaggatgtgaaacgg
gcatatttgcctccgccggaggggtttgaggaggcttatgtgaaaaaaactgatggcggc
ggattacctgagaagcgaaccactcagccagtggcgcgcaagcgggtacgaagtggtgaa
ggacccgcgcaggtgggggtctccgattcagccacacctgcggttatttctgctgctggt
gctacagaggtgaatactaacgtctccacctctgtagcggcaaatacacttcaagctaat
tttgatccatcatttgagcgcaccaattacttgggcaggtctttcttggagcctccccca
tcgctgcaaccgcgctcgcatgagtgccgtctcccacgacaaatgaaaggcagttgcgac
aagcatgcggcgggcattcaacagcttcagtggctacctcccgttggtcatttgttgttt
gccgctgatttaaagggtgaggtgaggctttacgagaccttctcttcccgccgtcagtgc
attgcttcatttgtagcccattcacaaccagtgaaatccctagaggtgactccggatggg
gaaacaatgtccacaggttctgttgatgggacggtagcgatgtgggacgttgaacatggt
gagtgccgaggcgtgctgacgaattcggagcggcttccctgcgtgcagcacctgcatcat
cctctagatccaacttccttaatacttgtagcactggacaggaaagtggtcctttatgac
gtgcgggtgagttaccagaagtaccaacgcgagtacacgggccatatggggaccattttt
aatctctcgctgcttagtggagggaagaaacttttaacgacagcggaggacaagacgctc
cgcacgtgggactttagggttccagttcaaatcaaacagattgcggatgtctctatgcat
gccatcactcatgtcgtgcggcaccccacagaagacatgcttgttgcccaatcgctcaac
aatcaagcacttgtattctctgatggtggtggaggacaagtgaagttacttcgtcatcgt
gtatttagcggccacacaatttcaggcacgcgttgtcaactggcatttagtcctgatggc
cgctatttgtcgagtggtgacatcaatggtaagttgtttatctggtcgtgggctactggt
gagctactacgatctttttcagcccacactcaaactcttgtgtcgcatcgctggcaccca
gttgaggcttcccgcgttgtcacctcagcgtgggatggtgccattaagacatgggcgtga

DBGET integrated database retrieval system