Trypanosoma brucei brucei: Tb927.3.620
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Entry
Tb927.3.620 CDS
T01013
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
tbr
Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tbr01009
]
Tb927.3.620
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbr03009
]
Tb927.3.620
Enzymes [BR:
tbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tb927.3.620
Protein phosphatases and associated proteins [BR:
tbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Tb927.3.620
Ribosome biogenesis [BR:
tbr03009
]
Eukaryotic type
Pre-60S particles
Helicases
Tb927.3.620
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF3071
Motif
Other DBs
NCBI-GeneID:
3655998
NCBI-ProteinID:
XP_843658
UniProt:
Q57WU5
LinkDB
All DBs
Position
3:complement(157055..159481)
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AA seq
808 aa
AA seq
DB search
MSLAGSERAHLCVHGLTENDEQDALRHLLSATGSSQLTDISDEVVVKGAAKRKNQAATQC
ANSSESIKDKKTQRSSEVQQQKPDGGTVGRVKKSSDVPVKRTASKVVPVPKEVEAESVAF
QADSVSHEAESLPPIAELVHKKLIRPLTEVLCINSLTRIQKLSWMPMVDKTRDVLVRSET
GSGKTLAYALPLLHQLLCDCDTRPLKRDVGSVIIVLCPVRELVVQVSDVLTILTRCALFL
TVGGIHGGENRHKEKARLRKGITILATTPGRLLDHLKATSSFRVEELQTIVLDEADRLLD
MGFEKTIREVMDLLVAKKRDAHQTGGGDAQSSFKRVLVSATITAAVERLSHFALRDNIVR
VGETEDTFSIPSSLRQHYVLVPTKHRLATLISFLRSQLDAGAQRLIVFVSTADSAEFHYY
LLSRLKSPFRGKTNSGRSAGAPQKNSNRYSLKKRIGEANRHIHEGRDEDVVTFDDDSDDE
DPTEVSELSEKNAVLDVNIFKLHGNMSQVDRASVFHAFKHMDSSVQPSKKGILFCTDVAA
RGLDMPNVDWIVHYDPPTDAPCYIHRIGRTARIGNTGDSMLFLMPHEEGYASYLSNFLAK
ETKLGSMAKGANAESGIIEERKYESFLFYLTKLDPKANHMWAQSTATLERAICRLVMKRH
SNEENVNDESTGRTDDITRLALFAYQSYIRAYAGHSRELKRLFFNSDALHLGHVAQNFGI
DKRPSEVRSQLQGLIKEDRKVARETTSVVLDDGSERPRKVLRTEVPHDDRYRSTVVQKQR
KVTRDWYENKKKLEGPTYKHQQFTEFDA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagcgggttccgagagggctcatctctgtgttcacggccttacggaaaatgac
gaacaagacgcacttcggcatttactctctgctaccggttcatctcagttaactgatatt
agtgacgaagtggttgtgaagggtgctgccaaaaggaaaaaccaagcggcaacgcaatgt
gcaaattctagcgaatctataaaagacaaaaagactcaacgttcttcggaagttcagcag
cagaaacccgacggtggaacggtgggacgtgtgaaaaaatcaagtgacgttcccgtaaaa
cgaacagcctcaaaagtagtgccggtgccgaaagaagttgaggcggagtccgtggcgttt
caagcagatagtgtaagccatgaagccgaatcacttcctcccatagcagaacttgtgcac
aagaagttgattcggcccttaacagaagttttgtgcattaactcgttgacgcgcatacaa
aaacttagttggatgcccatggttgataaaacacgtgatgttctcgtcagaagcgagacg
ggaagcggtaaaactttagcgtatgcgcttcctctgcttcatcaattgctctgcgattgc
gacacccggccactgaagcgtgacgtcggttctgtcattattgttttgtgtccagttcga
gagttggtagtacaggtgtcggatgtactcactattcttacgcgttgtgccctcttcctt
acggtaggcgggattcatggaggtgagaataggcacaaggaaaaggcgagactacgaaaa
ggaataacaattttggcaacgacgcctggaaggcttttggatcatctcaaggccacatca
tcctttcgagtagaggagttgcaaactattgtgttggatgaggctgatcggttactcgat
atggggttcgaaaagactattcgtgaggttatggatttgttagtagcgaagaaacgggac
gcacaccaaacaggcggcggggacgcgcaatcctcgtttaaacgagttctcgtttcggcc
accataacggcggctgttgaacgactctctcattttgcgctacgggataatattgttcgc
gttggtgagacggaggacactttttctattccttcatcgttgcggcaacactatgtattg
gtaccaacaaagcaccgcctggcaacactcataagctttcttcggtcgcagttggacgct
ggagctcaaagacttatcgtttttgtttcaactgcagacagtgctgaatttcattattat
ttgttgtccagattgaagtcaccttttcgtggcaagacaaacagtggcagaagcgctggc
gcacctcaaaaaaactcaaatcgctacagcttaaaaaagcgtattggggaagccaatagg
cacattcacgagggtcgagatgaggacgttgtcacttttgatgatgactcggatgatgag
gatccgactgaagtaagtgaattatccgagaaaaatgctgttcttgacgttaacatattt
aaactgcacggtaatatgtcacaagttgatcgagcctctgttttccatgccttcaaacat
atggacagcagcgttcaaccttccaaaaagggaattctcttttgcacagacgttgccgcg
cgggggcttgacatgcctaatgttgattggattgtgcattatgatccgcctactgatgcg
ccgtgttacattcatcgcattggccgcacagcacgtattggtaacacgggggattccatg
ttatttctcatgccacacgaggaggggtatgcatcttatttgagtaacttcttagcaaag
gaaaccaaattaggttccatggcgaaaggtgccaatgccgaatcaggaatcatagaggaa
aggaaatatgagtcattcctcttttatttaactaaattggatcccaaagccaatcacatg
tgggctcagagcactgcaactttggagcgcgccatatgccgactagttatgaagcggcat
tcaaacgaagaaaatgtgaatgatgaaagcaccggcagaactgatgacatcaccagactt
gcattattcgcctatcagtcatacataagagcatacgccggtcattccagggaacttaag
cgtcttttcttcaattccgatgcccttcatttgggtcatgtcgctcaaaactttggtatt
gacaaaagacccagcgaagttcgctcacagttgcaaggactcattaaggaagatagaaaa
gtggcaagagaaacaacatcagttgtgttggatgatggcagtgagcggcctcgaaaagtg
ctacgcacggaggtgccacatgatgaccgctataggagcacagtggttcaaaagcaacgc
aaagttacgagggattggtatgaaaacaaaaagaaactggagggtccaacatataaacac
cagcaatttactgaattcgatgcctaa
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