Trypanosoma brucei brucei: Tb927.4.3840
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Entry
Tb927.4.3840 CDS
T01013
Name
(RefSeq) nucleolar protein, putative
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tbr
Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbr03009
]
Tb927.4.3840
Enzymes [BR:
tbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
Tb927.4.3840
Ribosome biogenesis [BR:
tbr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Tb927.4.3840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Methyltransf_31
PCMT
BMT5-like
GCD14
TRM
DUF1993
Motif
Other DBs
NCBI-GeneID:
3656919
NCBI-ProteinID:
XP_844534
UniProt:
Q583H8
LinkDB
All DBs
Position
4:complement(1002060..1003637)
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AA seq
525 aa
AA seq
DB search
MSGNGGISGNYAPYEENEEVEYNDEEFGSYEEEESDYFSDGEEVEDDDDFEAKAIKFRQQ
MDKLHSEAAAEQEGDIRSRTAKPTLFGDAEEQEEDGEQVQLLGQQHTVEELRDRIGETVH
VLSHFKEEREEGRTREDYMQLLRADIMELYGYNEFLTDSILLLFSPTEAVEFFEAMEKPR
PTTIRVNTIKAKRRDLVQALVKRGMNVEPLEKWSKVGLQVFESNVPISGTVEYLAGHYML
QSAVSFLPVMALAPQINERVLDMAAAPGGKTTYIAQLMKNTGVIFANDVSEPRTKSLNAN
LQRLGVTNTVVTNYDGVGFEKVMKNFDRILLDAPCTGSGIISRDKSIKTSKQYEDVQRAS
QLQRSLLLSAIDAVRVGGYIVYSTCSFLVEENEAVVDFVLHRRDVAIVETGLPFGRPGLT
KYRHHRFHDKLQNARRLFPHVHNMDGFFVCKLKKLSNNAGGPSTNGLKKEESNVAKSENV
KTMKGTNKRQREDDSKAKGELKTKNNRISVPPATKKSPKSKGKSG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaatggcggtatcagtggcaactatgcgccatacgaggaaaatgaagaagtc
gaatacaacgatgaagaattcggatcctacgaggaagaagaaagtgattacttttccgat
ggtgaagaagtggaagatgatgatgactttgaggcgaaagctataaaattccgccagcag
atggacaagttacattcagaggctgcagcggaacaggagggagacatcaggtcccgaaca
gccaaaccaacactcttcggtgatgcagaggagcaagaagaggatggagagcaggtgcaa
ctgctgggacagcagcacactgtagaggagctaagagatcgcatcggtgaaactgtccat
gtcctttcccattttaaggaagagcgagaagaggggcgaacgcgggaagattatatgcag
ctgcttcgtgcagacatcatggaactctacgggtataatgagtttcttacagattcaatt
cttctcctgttttcgcccacagaggctgttgagttctttgaagcaatggaaaagccgcga
ccaacaactattcgggtcaacacaatcaaggccaaacgtcgtgacttggtgcaggccctt
gtgaagcgtggaatgaacgtagagccattggaaaagtggtccaaagtagggctccaggtg
tttgagtctaatgttcccatctccggcacagtcgaataccttgccgggcattacatgctt
cagtctgcagtatcgttcctacctgtaatggcgctggcaccgcaaattaacgagcgcgta
cttgatatggccgcggctcctggcggaaaaacgacgtatattgcgcagttgatgaaaaat
accggcgtcatttttgccaacgatgtcagtgagccccgtacaaaatccttgaatgcaaac
cttcagcggctcggtgtaacaaacaccgtggtgactaactacgacggagttgggtttgag
aaggtcatgaaaaacttcgatcgtattttattggatgccccgtgtacaggcagtggaatt
atttcccgggacaaaagcatcaaaacaagcaagcaatacgaagatgtgcagagagcctct
cagttgcagcggtcacttctcctctcagcgatagacgcggtgcgggttggtgggtacatt
gtgtattcgacttgctccttccttgtcgaggaaaatgaagcggttgtggacttcgtgctc
caccggcgtgacgtggccattgtggagacggggctgccatttggaaggccgggattgacg
aagtaccgccaccacaggttccatgacaagctgcaaaacgcccggcggctcttccctcac
gtgcacaatatggacggtttctttgtgtgcaagttgaagaaactttcaaataacgcaggc
ggtccgagcacgaatgggctgaagaaggaggaatctaacgtcgcgaaaagtgagaatgtg
aaaacaatgaagggaactaacaaacggcaaagagaggatgacagcaaggcaaagggggaa
ctaaagaccaagaacaatcgtatcagtgtcccgccggccacgaagaagtctccaaagagt
aaagggaaaagtggatga
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