Trypanosoma brucei brucei: Tb927.4.410
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Entry
Tb927.4.410 CDS
T01013
Name
(RefSeq) cell differentiation protein, putative
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tb927.4.410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb927.4.410
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Tb927.4.410
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
3656556
NCBI-ProteinID:
XP_844191
UniProt:
Q57UT4
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Position
4:complement(117385..118335)
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AA seq
316 aa
AA seq
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MHQTQAYLPYGFYQPQQAAAKQQPPVSEDMRRMFQYLEGLYKPETRENSILELAKDRESY
HHLGPALWYGVGIMSVLLQEIISVYPLLSTPHLLAKGMANRVSSVLTLLQAVAFHESTRR
MFLDSQMCLFLYPFLRGMNEGTEGLRLTSLGVIGALVKTDDHDVVQYLLNTEIFPLCLNI
MESGTEFSKTLATFIVQRLLNSEGGLKYVCLTPERFTAVATVLGKLVESKDCSTRLLRYI
IRCYLRLSENQRGREALSRCLPQALRNATYKQALESNTGLVRNLLQLLVNIGDAGATKLH
ESLLAGGKPQGGDASA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaacccaagcgtatttgccttacgggttttatcaaccacagcaggctgcagca
aagcagcaacctcccgtttcggaggatatgcgtcgtatgtttcaatacctcgaagggctt
tacaaacctgagacgcgtgagaactccattttggagttggcaaaagatcgcgaatcatat
catcatctcggacctgcgttgtggtatggcgtggggatcatgtcagttctattgcaggaa
ataatttctgtctatcccttgttaagtacacctcatcttcttgccaagggaatggcaaat
cgtgtgagcagcgtgttgactcttctgcaagctgttgctttccatgaatccactcgacgc
atgtttctcgattcacaaatgtgtctcttcctctacccatttctccgtgggatgaatgaa
gggactgaagggttgcgactcacttcccttggtgttattggcgctcttgtaaaaacagat
gatcatgatgttgttcagtaccttctcaacacggagatattccccctttgcctcaacatc
atggagtctggaactgaattttcaaaaactttggcgacatttatcgtgcagaggctcctt
aactcagagggaggtttgaaatatgtatgcctaactcctgaacggttcacggctgtggct
acggtgctggggaaattggtggaatcaaaagattgcagcacacgtctgttaaggtacatt
attcgctgctacctccgtctttctgagaaccagaggggacgtgaggctttgagccgttgt
ttaccacaagccctgcgtaatgccacttacaaacaagcacttgagagtaatacgggactg
gtgaggaatttgcttcagttgttagtaaatatcggtgatgcgggcgccacgaagcttcac
gagtcgcttctcgcaggtgggaagccacaaggcggtgatgccagtgcgtga
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