Trypanosoma brucei brucei: Tb927.4.960
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Entry
Tb927.4.960 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K24260
WD repeat-containing protein 11
Organism
tbr
Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbr04131
]
Tb927.4.960
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tbr03037
]
Tb927.4.960
Membrane trafficking [BR:
tbr04131
]
Endosome - Lysosome transport
Others
Others
Tb927.4.960
Cilium and associated proteins [BR:
tbr03037
]
Other cilia and associated proteins
Other cilium assembly proteins
Tb927.4.960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
TPR_GEMI5
WD40
Beta-prop_WDR11_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
TPR_WDR11
WDR90_beta-prop_4th
EIF3I
Pep3_Vps18
Beta-prop_HPS5
ANAPC3
Motif
Other DBs
NCBI-GeneID:
3656622
NCBI-ProteinID:
XP_844246
UniProt:
Q580C4
LinkDB
All DBs
Position
4:complement(263441..266977)
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AA seq
1178 aa
AA seq
DB search
MSQLTAILCPRLIPGKLASGGASAALIEDIKKWPYQAAQISCHDLLATSSYCEGSGEVII
IDINSMQLVQTLHGHASPVTSVQWNPTSPSCSHQGLLLFTGDRTGVLKVWNVTEGTTVNS
VQLPSNRPICAISLVTKKRILVVTQDSSCFVYDSHLSSNDPCDDPQLTFALGTNEKFIPL
CVRTSKLSEFWTSCVVLGDRIGMIYSQDQDRNGKSPRACVKNLVFESTDGFETVVDAVFS
ESQEGLLYFATRNSVGVYDCRANLLLDENVLRYSAGDGEFRRIFSSAPSTLTEDTQQLPL
LYSYGSNQRLTAWYLLRVGKATSVSTDVRGARIASKVATNVIQSLSAPNVFAVIFSDGSV
ARWRYRVDCRRWVIDSYFSAALKKPTGFCVLGDNTLCCALEAGYLALVDVAHSNALRRIN
FVNTSNTHIILLAPHSSKECVWVVTNKAEQSKQHHQVTLFDCHSGVVLQVLREPKYSDAT
RMKNITQDATGTFLLLTFFGGTFEVWNITESRIIYSYEGTGVASASWAPQIFTPVLAGLK
GAPELLLIVFSDGSMSFWTVSWDQVVPNRDAVPRFPNGSSTRVLCTPTRDASVVVDGSGA
VTVVGVGTSGLHVRSLKDIPAAKTAIALAVSKGGGGSDNKGEPSDAGNWSEEYLAVVFSD
GSFGVWSISSQERMGYSKNTDINLKARGATWLGDALLLLTLTGNIVVVDKLLTSINSSVF
SKALRRPLQNSAFFVPEHRMYIQTVLETQVACSAVPSEVRPSSDICPSCLIRGINPERFP
CRGPFGQVITAAISSLTRELDLYRKTMVPRYIYEGIQHAFTQSRTDEIALWVARFFGQQE
RQRLWMQFCLRRGLNCSGAEAGGDGGQQSKSVERWKGGPEVGPPVPYYCADRFSEVSAAS
EVVYNNHVYMNERRAEALEASKGKEIDVFSQRFLTARELLKLQQPQKAIDVLMDVSHEDN
RFPHLSDFAVAISASVAALSGPASELLTLTTSRVASLLRARGDLDSAVDKYMLSGHFYEA
VKALQLSGKWGEGAVLAKLSPLPVKQQRDLICRWCSHLVRHGQVMEAAVMLASQALPFQV
LVLLSESSQFEDIAGLLAMVLLEDPSFNTRESLQEPIVLPVAEDDSSDALTLGEVLLNVL
VDYANMLNTVGNVVSAKAVLEYVTSLKGRNRGITSTST
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttgactgccattttgtgtcccagactaattcctggaaagttggcttcgggt
ggcgcttccgccgctcttattgaggacataaagaaatggccgtatcaagcagctcagata
agttgccatgatttgttggcaacgagctcctattgcgagggctctggcgaagtgattata
attgatataaacagcatgcagttggtgcaaacattacatggccatgcttcaccggtaaca
tctgttcagtggaatccgacgtcgccttcgtgctcacatcaggggttgttactttttacg
ggcgaccgaacgggtgttttgaaggtatggaacgtcacggaaggtacgactgtcaacagt
gtccagcttcctagcaaccgtcccatttgcgcaatatcccttgtgacgaagaagcgtatc
cttgtggtgacgcaagactcttcctgttttgtatacgactcgcatctttcgagcaatgac
ccatgcgatgaccctcaactaacttttgcactcggaactaacgagaagttcatcccactt
tgcgtgcgcacatcgaaacttagtgaattttggacctcctgtgttgttcttggtgaccga
attggtatgatttactctcaggatcaggaccggaatgggaaaagcccccgtgcatgtgtg
aagaatttggtattcgaaagcacggacggttttgaaactgtcgtggacgctgtgtttagc
gagtctcaggaggggctcctgtactttgctacgagaaactcagtgggcgtctatgactgc
agggcaaacttgcttctcgatgagaacgtgttacgatacagcgcgggtgatggtgaattc
agacgcattttctcttctgcaccgagcacactgactgaagatacgcagcagcttccactt
ttgtattcgtatggatcaaaccagcgactcactgcgtggtacctgctacgtgtgggcaag
gcaacgagtgtgtctactgatgtcaggggtgcgcgtattgcgtcaaaggtggcaacaaat
gttatccagtctctgtcagcaccaaatgtttttgccgtcatattttctgatggatctgtg
gcacggtggcggtacagggtggattgccgacggtgggtgatcgacagttatttttccgcc
gctctaaagaagcccaccgggttttgcgtacttggcgacaacacgctgtgctgtgccctg
gaggcaggttacttggccctggttgatgtggcacacagcaacgccctgagacgaataaat
tttgttaatacaagcaacactcatatcatacttctcgcgccgcacagttctaaggaatgt
gtgtgggtggtgacgaataaggctgagcagtctaaacaacatcaccaggtgacattgttt
gactgtcacagcggtgtggtgctccaagtgctgcgtgagcccaagtactctgatgctaca
cgcatgaagaatatcacgcaagacgcgactgggacgttcctgcttttaactttctttggc
ggcacgttcgaggtttggaacattacagaaagccgcatcatttactcctatgaagggaca
ggggtggcgagtgcctcctgggctccccaaatctttacacccgtcctagcgggtttgaag
ggggctccagagctccttttgattgttttttcagatggttccatgagtttctggacagtg
tcgtgggatcaagtggttccaaaccgcgacgcggtcccgaggtttcccaacgggtcgtct
acccgggtgttatgtactccaacaagggatgcttccgtcgttgttgacggctctggtgcg
gtgactgttgttggcgtgggaacgtctgggttgcatgtgcgatcactgaaggatatcccc
gcggcgaagactgcaattgcattggccgtatcaaagggcggaggtggatccgataacaaa
ggggaaccctccgacgcaggaaattggtcagaggagtatcttgcggtcgttttttcggat
ggctccttcggcgtctggagtatatccagtcaagaacgcatgggatattccaagaacaca
gacatcaacctgaaggcgcgtggggcaacgtggttgggagatgcacttctccttctaacc
ctaaccggtaacattgtagtggttgacaagttactcaccagtatcaatagtagtgtgttc
agtaaggcattgagacggccactccagaacagtgccttttttgttccggagcatcggatg
tacattcaaacagtgctggagacccaagtcgcatgctcagcggtaccctctgaagttcga
ccctcaagtgatatctgtccaagttgcctaattcggggcattaatcctgagcggtttccg
tgtcgcggtccttttggacaggtgatcaccgccgccatttcctctttgacacgtgaactg
gatctttacaggaagacgatggtaccgaggtatatttacgaggggatacaacatgcgttt
acacagagtcgtactgatgagattgccctttgggtagctcgtttttttggtcaacaggag
agacagcgtctgtggatgcagttctgcttgaggcgcggtcttaactgtagcggcgctgag
gctggtggcgatggtggtcagcagtccaagtctgttgaacgatggaagggaggtccagaa
gttggacccccagtaccttattactgcgcggatcgcttttctgaagtttccgcggcatcc
gaggtagtttacaacaaccatgtctacatgaacgaacgccgtgctgaggcgcttgaagcg
tctaaagggaaggagattgacgtgttttcacaacggtttctcactgcgcgcgagttgttg
aagcttcagcagccacaaaaagctatagatgtcctcatggacgtcagtcatgaagacaac
cggtttcctcacctgtcagattttgctgtggctatctctgcatcggttgctgccctcagt
ggaccagcttcggagcttttgacacttacaacaagccgggtggcttctcttctgcgagct
cggggtgacttagacagtgccgtcgataagtacatgctgtcgggccacttctatgaagca
gtgaaagctttgcagctttcgggcaagtggggtgagggtgctgtgcttgcaaaactttct
ccccttccagtcaagcagcaacgagatcttatctgccgatggtgttcgcacttggtcagg
cacggtcaggtaatggaagcggcagtaatgttggcttcgcaggcccttccgtttcaggtg
ctcgttttgcttagtgagtcttcccagtttgaagacattgccggtttgctggctatggta
ttgttggaggatccctccttcaacacacgagaatccttgcaggaaccgattgtacttcca
gtggcggaagatgactcctctgatgccttaacactgggagaagtattactgaacgtcctg
gttgattacgcaaacatgctgaacaccgtcgggaacgttgtttctgccaaagcggtgttg
gaatacgttacctctttgaaaggcaggaaccgggggataacttccacctccacctaa
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