Trypanosoma brucei brucei: Tb927.5.4030
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Entry
Tb927.5.4030 CDS
T01013
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7p
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03018
RNA degradation
tbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tb927.5.4030
09123 Folding, sorting and degradation
03018 RNA degradation
Tb927.5.4030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb927.5.4030
03041 Spliceosome [BR:
tbr03041
]
Tb927.5.4030
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Tb927.5.4030
mRNA degradation factors
5'-3' decay
Lsm complex
Tb927.5.4030
Spliceosome [BR:
tbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
Tb927.5.4030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
BPL_C
Motif
Other DBs
NCBI-GeneID:
3657513
NCBI-ProteinID:
XP_845073
UniProt:
D6XGY7
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All DBs
Position
5:complement(1243191..1243469)
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AA seq
92 aa
AA seq
DB search
MSAQQAHILKKKESILSLEPHLDRRVVVSLEDREVHGVLKGFDNNINLVLANAEIWNKDV
RERQIGACVVRGGLLVSVSSGDTAILQQNPFQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagcaggcacacatccttaagaaaaaggagagcatactttcactagagccg
catctggatcgtcgtgttgttgtttcattggaggaccgcgaagtgcatggcgtgctgaag
ggattcgacaataacattaaccttgtccttgcaaacgcggagatatggaacaaagatgtg
cgcgagcgtcaaatcggtgcctgcgttgtccgtggaggtctcctcgttagtgtgtcatca
ggtgacacagcaatccttcaacagaacccattccagtaa
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