Trypanosoma brucei brucei: Tb927.6.2770
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Entry
Tb927.6.2770 CDS
T01013
Name
(RefSeq) vacuolar assembly protein vps41, putative
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Tb927.6.2770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbr04131
]
Tb927.6.2770
Membrane trafficking [BR:
tbr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
Tb927.6.2770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
LysM
WD40_WDHD1_1st
Beta-prop_HPS5
zf-ANAPC11
zf-RING_Vps41
WD40_CDC20-Fz
zf-C3HC4_2
Clathrin
WD40_Prp19
Beta-prop_EML_2
HCV_core
zf_RING_Vps8
zf-rbx1
LysM_RLK
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
3657916
NCBI-ProteinID:
XP_845398
UniProt:
Q583Q7
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All DBs
Position
6:831252..834530
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AA seq
1092 aa
AA seq
DB search
MSIARLEPSVNDETQRGNLAREEEDEEVQQEGSEREVPYSHVSDGTDNEDYTGDVTGGEE
SDYEEGSEVEQENLLSFSAFPLEAIGGQHVMVITAFRRFVAVGTSRGDVVLLEATSGVVF
RLLHAHTNPISDITCDTSEKYIGSSDMSGLVTIHNLTGGTESYRKDFGRSIKSLSIHPFY
GRRDERPAVVSSSDDVMLITKTMFLGRNVSVIHQKHGKVFCVKWCGADIIAWASETGVVL
YSYSGKEVLQSIPRPENSLHLELYNCSLIWEPPRTLTCGWGNWIQEVVLRVSGRESGSRN
QRVIVHPPVLTDTLRDPFRVCGMAAFGADRYAVLAATVEQEGCVGELGVRIVDRATFDPV
YCARIATSHKHTLQFCLAFTQASCESAFEAPKLTMNNTPQHDPALPTKGSMYFVGCGDVI
IRAAPADEDDHVQYLLGVGQVPEAYEYAQKYALTRYDLKGIGWRMLQHLLAVGKHEEAAF
HLPRIIQYDCTEWETWIVKFDQRGLSHLLADVVPTKLPGNGSQSGCAGETGNRSERIGEE
YYELLLQRCLEKDVARFRKAVRRLSGLYKLEVICRAAEVRYNDWRLQVHRGSNVPEEEMR
DLGDAYGMLLKLNGQYNEALRVLSRVAHSNELFELVQERHLFSEALELLPELFATNEGKT
VELLLTPAPISSSTTTSSNAPATLTEDENDIDDHCLGPPLLFPPASVVQRLEFAHRGYLW
SYLKALKMHDKAAYKEILRVYVQLVATLFIENEPSGMLQFLRENYSMLPKLKEIYALCKK
EQMLDEMVFLLLRMGKEEEGLYVIVHEMKNMRKAVQFVADVPNKEDQTSLYKKLIHMVLE
ANAGFPSRNGQKYIEHEMKADETLSSIARRYGVDESDLRAANPVLDAEGGGGCSGNVSDL
GDVVPQRRTCIVPLDLTKELIEAVVDMSVAHLVTLDPSLIIELLPDEEPMPHVGNCLATV
ARSKANSVALMEAVVCVATSDLLTCFESFYKRELSCIRVTHDGAVCPLCRRPTSEGVVVF
RCLHAHHLRCVVNYFSGDNTLFDSLSNDEVERILKDPDGFINSTQWSGPISCCFCNQLTR
VAELVEVEMQSA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagcgcggttggagccatctgtaaacgatgagacccaacggggaaatttagca
cgagaggaggaggatgaggaagttcaacaggaaggatcggagcgggaagtcccttacagt
cacgtctccgacggcaccgataatgaggattatacgggggacgtgacaggtggtgaggag
agcgattacgaagagggatctgaggtggagcaagaaaaccttctgtcattctctgcattc
cccttggaggctattggtggtcaacacgtcatggttataacggcattccgccgctttgtt
gctgtaggcactagtcgtggcgacgtggtgctgctggaagccacgagtggcgtagtgttt
cgattgcttcacgctcataccaaccctattagtgatatcacttgtgacaccagtgaaaag
tacattggttcttcagatatgtcagggttggtcaccatacacaatcttactggtggtacg
gagtcctacaggaaggattttggtcgctcgatcaagtcgttatctattcatcccttttat
ggtcgcagggacgaacggcctgctgttgtttctagttctgacgatgttatgctcatcacc
aaaactatgtttcttggccgaaatgtttcggttatacaccaaaagcacggaaaggtgttt
tgtgtgaagtggtgcggtgccgacattattgcatgggcaagtgagactggtgttgtatta
tacagttattcaggaaaggaggtactgcagtctattccacgacctgaaaattctttacat
cttgagttgtataattgctcgctcatctgggagcctccacgcacgcttacatgtggatgg
ggtaactggattcaggaggttgtgttgcgtgtaagcggtcgtgagtccggatcccgcaac
caaagggttattgttcatccccctgttctaacggatacgctgagggacccatttcgtgtt
tgcggtatggcggcttttggtgcagatcggtacgctgtactcgctgcgacagttgaacag
gaaggttgtgtgggagaattgggcgtgcgcatcgtggaccgcgcaacattcgatcccgtt
tactgcgcaagaatagctacaagccacaagcacactttgcagttttgtttggctttcaca
caagctagttgtgagagtgcctttgaggcaccaaaactcaccatgaacaacacccctcag
catgatcccgcactcccaacaaaagggtccatgtactttgttggatgcggcgacgttatc
attagggcagcacctgccgacgaagatgatcacgttcagtatcttctgggtgtgggtcaa
gttccggaggcttatgagtacgcacaaaaatatgctcttacaaggtacgatttgaagggt
atcggttggcggatgcttcaacatcttttagcggttggaaaacatgaggaagctgctttt
catctcccccgcataattcagtatgattgtaccgagtgggaaacctggatagtgaagttt
gatcagcgggggttatctcacttgttagcagatgtggttcccaccaagttgcccgggaac
ggcagtcagagtggttgcgctggagagacaggcaatcgttccgaaaggataggagaggaa
tattatgaacttcttcttcaacgttgtctagagaaagatgtggcgcgattcaggaaggcg
gtgcggcgcctctccggtctttacaagttggaagttatctgccgcgcagcagaagtacga
tacaacgattggcgtttgcaagtgcatcgtggtagtaatgttcctgaagaagagatgcgg
gaccttggtgatgcttatggtatgcttttgaaacttaatggacaatacaacgaggcattg
cgggttctgtcgcgtgttgctcacagtaatgaactgtttgaacttgtccaggaaaggcat
ctctttagtgaggcattggaacttcttcctgagctgtttgccacaaacgaaggcaagact
gtggagcttttgctgacaccggccccaattagcagcagcaccaccacttcatccaacgcc
cctgcaactttgacagaggacgagaatgacatcgatgaccactgcttgggtcctcctttg
cttttcccccctgcgtctgtggttcagcgtctagagtttgcacaccgtggatatttgtgg
tcatacctgaaggcactgaaaatgcacgataaggctgcatacaaggaaatactgagggtg
tatgttcaacttgtagccacacttttcatcgaaaacgaaccttccggcatgttacagttc
ctccgtgagaattactccatgctgcccaagttaaaggagatatatgcactttgcaaaaaa
gagcaaatgcttgacgaaatggtttttctattgttgcgaatgggtaaggaagaggagggt
ctttacgttatcgtacacgaaatgaagaacatgagaaaagcggtacaatttgttgccgat
gtacctaacaaagaggaccaaactagtctctataagaagttaatacacatggtgttagag
gctaacgccggttttcccagccgtaacggtcaaaaatacattgaacatgaaatgaaagca
gatgaaacactgtcgagcatcgcaaggaggtatggtgttgacgaaagtgatctgcgcgcg
gcaaaccccgttctggacgcagagggaggagggggttgtagtggcaacgtatctgattta
ggtgatgtggttccccaacgccgtacttgcattgtgcctttggatttgacgaaggaactt
atcgaagctgttgtcgatatgtcggtcgcacatttggtaacactagacccctcactcatt
atcgaactacttcctgatgaggaaccaatgccccacgtaggaaattgtttagccactgtc
gcgcgtagcaaagccaacagtgtggccctcatggaagctgtcgtgtgtgtggccacgagt
gacttattaacttgcttcgagtcattttacaagcgcgagctatcctgtattcgtgtaact
cacgatggtgcagtgtgtcccctttgtcgacgcccaacgtcagagggtgttgttgttttt
aggtgcttacacgctcatcatttgcgatgtgtggtgaattacttctctggagataacaca
ctattcgattcattgagcaatgacgaagtcgaacgaatcctcaaagaccctgatggattc
atcaactcaacgcagtggtctggaccgataagttgttgtttttgtaaccagttgaccaga
gtggcagaattagttgaggttgaaatgcagagcgcatag
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