KEGG   Trypanosoma brucei brucei: Tb927.6.2960
Entry
Tb927.6.2960      CDS       T01013                                 
Name
(RefSeq) epsilon-adaptin, putative
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    Tb927.6.2960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tbr04131]
    Tb927.6.2960
Membrane trafficking [BR:tbr04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    Tb927.6.2960
SSDB
Motif
Pfam: Adaptin_N AP4E_app_platf Cnd1 HEAT_EZ HEAT HEAT_2 PDS5
Other DBs
NCBI-GeneID: 3657933
NCBI-ProteinID: XP_845417
UniProt: Q583N8
LinkDB
Position
6:882892..885969
AA seq 1025 aa
MSKLYKAQTEMVHTWEFTAFIRAVGEARSKQEEDEIIQRDLGNLRKSFETAHVEDWLLKE
YVVRVLYAEMLGHPAKFAHIHCVNLSASPDLLVKRTGYLGTWLTIAPQEDIMILIVSNLL
RDMNSCNFLHTAAALTAASKVVRRDLICAIKPEVVKLLDHSAPLVRKKAVIALHALYRNT
ADLIDYKNFFLRALGDPNPAVEAAALSPLLDIVQTNPELCRDLTETFIKVLEKVVSRRLS
GDYEYQRVPGPWFQIQVMRILAALVCDSRELAAKCEYVLTEVITRADTGSTIGYAVACEA
ISLITRIPTIPSLIELSVETTAKMFATRNVNLRYTAIQALSNLACINTDYLRRHQEDILE
CLGDGDEMIRRKTTFLLLSMCNEGNVDIIVKKLIKYLNSQIDKYVLQELTQSICRTVERF
SMRRLWYISTMNRLLLCAAEHVPYSSIQGMLKLIVEGGESGDEASDVAFRLRCVEDYFGL
ISCSQKKMPDALCRVAAWVVGEYGFLATAINRRLMVDGLCDLFARTDSGDARDWIIMAVM
KIVASDGVVPENVKELIERFKDSRIATTQQRCYEFSRLTQMLPLMKRSLPLDRCCEEVDI
EETLSFLNPFVQKALLGGAKPYEKRPVCREVRMEIPLCIEKYETPQLKTSEASLTCEVCD
TEAKPPELAIRPSTRRWGAKTGNAAAMVNTGLAPDSHMREVGGGERITLSAQVARTGATL
DEPCGVFGPQCDQSLPATPPTLGTKCSKNKKLLEDIFDASVQLKKYPHVAQQVPDLFEAV
EVENKKNLAGENGSALSVHMEHVREERAVGITLFIVGNVTVNDLVVNVLPPSNCTLHVTS
HSVQSAKLTGSTTITMETLKVNQSLEVVMQLLLTGFPNDMHVRVKVVYRRSEPFDMIDVG
KSESKTATMTLQVGDFLRPASSMTTDTFGEMWLKYIGEYKTTLHGTAALTLESISQLLME
RASLRVVEMIGNELIVAAVLPGTDQLLLGHVVLVDHHCANATFRAQDKRLAEFVVRSLDS
AIPLS
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgtctaagctttacaaggctcagacagagatggtgcacacatgggagtttaccgccttt
atccgtgcagtaggcgaagcccgctctaaacaagaggaagacgaaatcatacaacgtgac
ctcggtaatctccgcaaatctttcgaaaccgcacacgtggaggactggctactgaaagag
tacgttgtgcgcgtgctttacgctgaaatgctcgggcacccagccaagtttgcgcacatt
cattgcgtgaacctttcagcaagccctgacttgctggtgaagcgcactggttaccttgga
acttggctcacaattgcaccacaggaggatatcatgattctcatagtgtctaatttgcta
cgcgatatgaattcatgtaattttcttcacactgctgcagcattaactgcggcatcgaaa
gtagtgcggcgcgacctcatctgtgcgatcaaaccggaagtggtgaagttgcttgaccac
tcagcaccactagtacggaaaaaggctgtgatagcgctgcacgccctctatcgtaacaca
gccgatcttatcgactacaaaaacttttttctcagggcactaggtgatcctaatcctgct
gttgaagccgccgcactttccccattgttagacattgtccaaacaaatcccgaattgtgc
cgagacctgacagagactttcataaaggttctcgaaaaagtcgttagccgccggctgtca
ggggactacgagtaccaacgcgtcccagggccttggtttcaaatccaagttatgcggatt
cttgcagccctagtatgtgacagccgtgaacttgctgcaaagtgtgagtacgttttgact
gaggttatcacgagagcagacacggggtctaccattggatatgcagttgcttgcgaagca
attagcttgataactcgaattccgacgattccctctctgatcgaactttcagttgaaacg
accgcaaagatgtttgccacgaggaatgtgaacttgcgctatactgctattcaggcactt
tccaacctcgcgtgtatcaacactgactatcttcgcagacatcaggaagacattttggaa
tgtttgggggatggtgacgagatgattcgccgcaaaacgacgttcctactcctttcgatg
tgcaacgagggaaatgtggatattatcgttaaaaaactgatcaaatatttgaatagtcag
atcgataagtatgttcttcaagagctcactcagagcatctgtagaacggtggagcgtttc
agcatgagaaggctatggtatattagtacgatgaacagactgcttctttgcgcagccgag
catgttccatattcctcaattcaaggaatgttgaaactcattgtcgaaggcggtgaatct
ggggacgaagcgtcggatgtggcatttcgtttgcgttgtgtggaggattattttggactg
attagttgctcacaaaagaaaatgccagatgctttgtgtcgtgtggccgcgtgggttgtt
ggtgagtatggcttccttgccactgcgataaatcgaagactgatggttgacggactgtgc
gatttgtttgctagaacggacagcggtgatgcacgggattggataattatggcggtgatg
aaaattgttgccagtgatggtgtggtaccagagaatgtgaaggagctcatagagcgcttc
aaggatagtaggatcgctacgacacaacaacgctgttacgaattttcgaggctcacgcaa
atgttacctttgatgaaacggtcgctaccgttggataggtgttgtgaagaggtcgatatc
gaggagacattgagttttctcaaccccttcgtgcagaaggcgctgctcggtggtgcaaaa
ccttatgagaagcgacctgtttgccgcgaggttcggatggagattccgctctgcattgaa
aaatatgaaactcctcaactgaaaacttcggaagcgagtttgacttgcgaagtgtgcgac
acggaggcgaaaccaccggaactcgcaatacgccccagcacgaggcgatggggcgctaag
accggtaacgcagctgcaatggttaacacgggtttggcgccggattcacacatgcgggaa
gtcggtggcggcgagaggataaccttatcggctcaagtggctcgcacgggtgcgacgtta
gatgaaccttgcggagtctttgggccacaatgtgaccagtccttaccagctaccccaccg
actttaggtacaaagtgttctaaaaacaaaaaattgctggaagatatttttgacgcatca
gttcagctgaaaaaatatccccacgttgcgcagcaggtgccagatttatttgaggctgtc
gaagtggaaaacaaaaagaatctggcaggagagaacggctcggctcttagcgtccacatg
gaacacgtaagggaagaaagagcggtgggtatcacattgtttatagttggcaacgtaacg
gtgaatgatctagtagtcaacgtacttcctccgtctaactgcactctccatgtcacatca
cattctgtacaatctgcgaagcttaccggaagtactactattactatggagacactgaag
gtgaatcagtcactcgaggtagttatgcagcttcttcttactggattcccaaatgatatg
catgtgcgggtaaaggtagtttatcgacgctccgaaccctttgacatgattgacgttggt
aaatcagagtccaaaactgcgaccatgacgctgcaagtcggtgattttcttcgcccggct
tcgtcgatgactaccgacacgttcggcgagatgtggctgaagtatatcggggaatacaaa
acaacacttcacggcactgcagcattaacacttgagtctattagccagttgctgatggag
cgggcctccctacgtgtcgtagaaatgattggaaatgaactcatagttgcggctgtgctg
cctggaactgatcaactactactgggccacgttgtccttgtggatcatcattgcgccaac
gcgacctttcgtgcgcaagataaaaggttagcggagtttgtagtccgctcattggacagc
gcgataccattgtcgtag

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