Trypanosoma brucei brucei: Tb927.6.2960
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Entry
Tb927.6.2960 CDS
T01013
Name
(RefSeq) epsilon-adaptin, putative
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tb927.6.2960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbr04131
]
Tb927.6.2960
Membrane trafficking [BR:
tbr04131
]
Endosome - Golgi transport
Others
AP-4 complex
Tb927.6.2960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
HEAT_EZ
HEAT
HEAT_2
PDS5
Motif
Other DBs
NCBI-GeneID:
3657933
NCBI-ProteinID:
XP_845417
UniProt:
Q583N8
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All DBs
Position
6:882892..885969
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AA seq
1025 aa
AA seq
DB search
MSKLYKAQTEMVHTWEFTAFIRAVGEARSKQEEDEIIQRDLGNLRKSFETAHVEDWLLKE
YVVRVLYAEMLGHPAKFAHIHCVNLSASPDLLVKRTGYLGTWLTIAPQEDIMILIVSNLL
RDMNSCNFLHTAAALTAASKVVRRDLICAIKPEVVKLLDHSAPLVRKKAVIALHALYRNT
ADLIDYKNFFLRALGDPNPAVEAAALSPLLDIVQTNPELCRDLTETFIKVLEKVVSRRLS
GDYEYQRVPGPWFQIQVMRILAALVCDSRELAAKCEYVLTEVITRADTGSTIGYAVACEA
ISLITRIPTIPSLIELSVETTAKMFATRNVNLRYTAIQALSNLACINTDYLRRHQEDILE
CLGDGDEMIRRKTTFLLLSMCNEGNVDIIVKKLIKYLNSQIDKYVLQELTQSICRTVERF
SMRRLWYISTMNRLLLCAAEHVPYSSIQGMLKLIVEGGESGDEASDVAFRLRCVEDYFGL
ISCSQKKMPDALCRVAAWVVGEYGFLATAINRRLMVDGLCDLFARTDSGDARDWIIMAVM
KIVASDGVVPENVKELIERFKDSRIATTQQRCYEFSRLTQMLPLMKRSLPLDRCCEEVDI
EETLSFLNPFVQKALLGGAKPYEKRPVCREVRMEIPLCIEKYETPQLKTSEASLTCEVCD
TEAKPPELAIRPSTRRWGAKTGNAAAMVNTGLAPDSHMREVGGGERITLSAQVARTGATL
DEPCGVFGPQCDQSLPATPPTLGTKCSKNKKLLEDIFDASVQLKKYPHVAQQVPDLFEAV
EVENKKNLAGENGSALSVHMEHVREERAVGITLFIVGNVTVNDLVVNVLPPSNCTLHVTS
HSVQSAKLTGSTTITMETLKVNQSLEVVMQLLLTGFPNDMHVRVKVVYRRSEPFDMIDVG
KSESKTATMTLQVGDFLRPASSMTTDTFGEMWLKYIGEYKTTLHGTAALTLESISQLLME
RASLRVVEMIGNELIVAAVLPGTDQLLLGHVVLVDHHCANATFRAQDKRLAEFVVRSLDS
AIPLS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagctttacaaggctcagacagagatggtgcacacatgggagtttaccgccttt
atccgtgcagtaggcgaagcccgctctaaacaagaggaagacgaaatcatacaacgtgac
ctcggtaatctccgcaaatctttcgaaaccgcacacgtggaggactggctactgaaagag
tacgttgtgcgcgtgctttacgctgaaatgctcgggcacccagccaagtttgcgcacatt
cattgcgtgaacctttcagcaagccctgacttgctggtgaagcgcactggttaccttgga
acttggctcacaattgcaccacaggaggatatcatgattctcatagtgtctaatttgcta
cgcgatatgaattcatgtaattttcttcacactgctgcagcattaactgcggcatcgaaa
gtagtgcggcgcgacctcatctgtgcgatcaaaccggaagtggtgaagttgcttgaccac
tcagcaccactagtacggaaaaaggctgtgatagcgctgcacgccctctatcgtaacaca
gccgatcttatcgactacaaaaacttttttctcagggcactaggtgatcctaatcctgct
gttgaagccgccgcactttccccattgttagacattgtccaaacaaatcccgaattgtgc
cgagacctgacagagactttcataaaggttctcgaaaaagtcgttagccgccggctgtca
ggggactacgagtaccaacgcgtcccagggccttggtttcaaatccaagttatgcggatt
cttgcagccctagtatgtgacagccgtgaacttgctgcaaagtgtgagtacgttttgact
gaggttatcacgagagcagacacggggtctaccattggatatgcagttgcttgcgaagca
attagcttgataactcgaattccgacgattccctctctgatcgaactttcagttgaaacg
accgcaaagatgtttgccacgaggaatgtgaacttgcgctatactgctattcaggcactt
tccaacctcgcgtgtatcaacactgactatcttcgcagacatcaggaagacattttggaa
tgtttgggggatggtgacgagatgattcgccgcaaaacgacgttcctactcctttcgatg
tgcaacgagggaaatgtggatattatcgttaaaaaactgatcaaatatttgaatagtcag
atcgataagtatgttcttcaagagctcactcagagcatctgtagaacggtggagcgtttc
agcatgagaaggctatggtatattagtacgatgaacagactgcttctttgcgcagccgag
catgttccatattcctcaattcaaggaatgttgaaactcattgtcgaaggcggtgaatct
ggggacgaagcgtcggatgtggcatttcgtttgcgttgtgtggaggattattttggactg
attagttgctcacaaaagaaaatgccagatgctttgtgtcgtgtggccgcgtgggttgtt
ggtgagtatggcttccttgccactgcgataaatcgaagactgatggttgacggactgtgc
gatttgtttgctagaacggacagcggtgatgcacgggattggataattatggcggtgatg
aaaattgttgccagtgatggtgtggtaccagagaatgtgaaggagctcatagagcgcttc
aaggatagtaggatcgctacgacacaacaacgctgttacgaattttcgaggctcacgcaa
atgttacctttgatgaaacggtcgctaccgttggataggtgttgtgaagaggtcgatatc
gaggagacattgagttttctcaaccccttcgtgcagaaggcgctgctcggtggtgcaaaa
ccttatgagaagcgacctgtttgccgcgaggttcggatggagattccgctctgcattgaa
aaatatgaaactcctcaactgaaaacttcggaagcgagtttgacttgcgaagtgtgcgac
acggaggcgaaaccaccggaactcgcaatacgccccagcacgaggcgatggggcgctaag
accggtaacgcagctgcaatggttaacacgggtttggcgccggattcacacatgcgggaa
gtcggtggcggcgagaggataaccttatcggctcaagtggctcgcacgggtgcgacgtta
gatgaaccttgcggagtctttgggccacaatgtgaccagtccttaccagctaccccaccg
actttaggtacaaagtgttctaaaaacaaaaaattgctggaagatatttttgacgcatca
gttcagctgaaaaaatatccccacgttgcgcagcaggtgccagatttatttgaggctgtc
gaagtggaaaacaaaaagaatctggcaggagagaacggctcggctcttagcgtccacatg
gaacacgtaagggaagaaagagcggtgggtatcacattgtttatagttggcaacgtaacg
gtgaatgatctagtagtcaacgtacttcctccgtctaactgcactctccatgtcacatca
cattctgtacaatctgcgaagcttaccggaagtactactattactatggagacactgaag
gtgaatcagtcactcgaggtagttatgcagcttcttcttactggattcccaaatgatatg
catgtgcgggtaaaggtagtttatcgacgctccgaaccctttgacatgattgacgttggt
aaatcagagtccaaaactgcgaccatgacgctgcaagtcggtgattttcttcgcccggct
tcgtcgatgactaccgacacgttcggcgagatgtggctgaagtatatcggggaatacaaa
acaacacttcacggcactgcagcattaacacttgagtctattagccagttgctgatggag
cgggcctccctacgtgtcgtagaaatgattggaaatgaactcatagttgcggctgtgctg
cctggaactgatcaactactactgggccacgttgtccttgtggatcatcattgcgccaac
gcgacctttcgtgcgcaagataaaaggttagcggagtttgtagtccgctcattggacagc
gcgataccattgtcgtag
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