Trypanosoma brucei brucei: Tb927.8.5090
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Entry
Tb927.8.5090 CDS
T01013
Name
(RefSeq) DNA-directed RNA polymerase I largest subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tb927.8.5090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb927.8.5090
Enzymes [BR:
tbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tb927.8.5090
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Tb927.8.5090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
3659512
NCBI-ProteinID:
XP_847339
UniProt:
Q57UI1
LinkDB
All DBs
Position
8:1502733..1508078
Genome browser
AA seq
1781 aa
AA seq
DB search
MSLITDFPFHAYLGDLKTRRVMGAKDAVSLSLLASEDMSGIAFVEVRTRAGQEDRSAPWR
PVVRNGENHATFYDTRMGNFDANPFPPQTCQTCAASLTGKYGNERCHGHFGFVGMPRIRP
GSAHSDSDRLVVLNPHLAMDADRLFRAKCFFCHKFRAPTFDVERFRQALVLADHGLPGDA
LHLLDTVPTAKGHDAMLNHRRMANEEIVNDVSILQSYVDRILRQRASGCSEEDAKARVTM
AQKGTVDVRNDICNMAISHLRSFSGPCSHCTAISPTFLKRGGIIFFLFRKSNLVTNIAKG
FLTQQEVSEWEAVNRLHGRTGTYFDGRQMLFHMKNLFAKEQAILGLLYPNLGEPSVFTKT
NKVVPASERYKLFFLDRILVPPLPLRLSSGVRVNDNGLIIPDEQTRALSDILGFVEQIEC
FHTLSANSTNGRSFITDAQRAVNESNLRNLQQKVDEFYAEIINSFAKKEGLFRMNMMGKR
VNQACRSVISPDPFVEPNEVLLPRPLARALSFPEQVTCFAPARMNLLKHCVVNGPRKYPG
ATHIELRHANGEIRSVDLNVPEQTRRQHAARFFAMAQSGVTLIVYRHILNGDRVIFNRQP
TLHKPSMMGYRVKVLSGSKTIRFHYVNGNSFNADFDGDEMNVHVPQSIETRAEVETLMDA
NINYLVPTSGRPIRGLIQDHVAAGVLVTLRDKFFDHSTFVQLVYNGVGPYIQENVGITLA
ELIPIPAILMPRPMWTGKQLISVMVRFSSGLSAASDCGREIEGGITLKGTSQIQPSAFDR
IPAGSCDAVRVKSGAVVDSTVMFANSELITGFMCKKQLGASNMSAPHHVYELYGPHRTGQ
LFAAFGRVLLLALRKEGLSLAMDDMFLVDEERRCDLLRKLDDIALDVPDEEATAAPMIAD
YATKIQQEFVPQRMLVPFPKNHLLLMTISGAKGSNLNATQMSLQLGQQLFDGLRVKRMNS
SKTLPSFFTNEKRARSFGFAMGSFASGIRPAEYTIHAMAGRDGLIDTAVKTSRSGHLQRC
LIKGLESLVVHWDRTVRDSNGSVIQFMYGGDGLDPCKASTLTAWEMMKDNVVDVSKRFGG
DASESVAGAEDGAAAGLEEMRNEDGKPTTEAVQNAHMEQQLSTYPLPASLDKSLSEYLCK
KADFPLFRKVSTLARWDAKQQLKERLQQRRQKWVGAFEKTLADITARRRLWALCEPGEPV
GLLAAQAAGEPSTQMTLNTFHTAGSTVSHVTEGIPRLRELLIYASVNKAAVVVPVTNATE
EDEKVIAKMLRAGVAAKLTDCLAKVTDGAGGQSASSSMQRNLNTGFGKGYHYHVARGRTG
MVITVSFLFSRSCLEELRKRMCMSPSEHRQSFTEALKNVVRLIMRSLSAVPREKESGDGS
GNTGGMKGGSGRADRKRKRSGPDDGGGPLGGTFGDEIMRIEEGTDSDDGMSERSSIGGGR
AGSEVSSLHSDGTDTRGIAGSDTGGPQRRRGSVESGRGDDASDSEAADPDLYARRSGSPA
RDAEDGDEMQDRDGTDWGGTSMQGVVGYDNFPEIHMSFTKSNFGAVIAPLSTAAAARDGV
VQLHEDFFIVNAVLRTPSDVIAVIPDVVDNALEAQRMPSWLPQFGSLTFTRLKDKGSGQL
VFQGPGSTMRNVMSFLSLFTVGIKSIKLHQACSTDIRDMGTYFGIESGYAALYDELNKLF
NRYNVDPRHLSLIADTSTHRGRWENFNFTGVISTSASPLFQMTFASSKRWLHRAVSRGMS
DDLESFSSAIMVGERPRVGTASVRLSTDTAILRDVLERNFA
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcattacagactttccattccatgcttacttgggtgacctgaagacccgccgt
gtgatgggcgccaaggacgccgtgtccctgtctctgcttgcatctgaggatatgtcgggg
atcgctttcgtggaggttcgcacgcgtgccggccaggaggatcgttcggcaccttggcgt
ccagttgtaagaaatggtgagaatcacgccacattctacgacactcgaatgggtaacttc
gacgctaacccgtttccaccacagacatgtcaaacgtgcgcagcgagcttgacaggaaag
tacggcaatgaacgttgtcacggtcactttggatttgttggaatgccgcgtatccgccca
ggcagtgcgcattcggactccgatcgccttgtcgttttgaatccgcacctcgcgatggat
gcagatcgtttgttccgagcgaaatgcttcttttgtcacaagtttcgagcaccaacattt
gatgtcgaacgattccgccaggcactggttctggccgaccatggtttaccaggagatgcg
ctgcatcttctcgacacagtgccaacagcgaagggtcacgatgctatgctgaaccacagg
cgcatggcaaatgaggaaatcgtcaacgatgtatccatccttcagtcgtatgttgatcgt
atcttaaggcagcgcgctagtggatgcagtgaggaggatgcgaaagcaagagtgactatg
gcacagaagggaactgtggacgttcgcaatgacatttgcaacatggcgattagtcatcta
agatcattcagtggtccttgtagccactgcactgctatttctccgaccttcttgaagcgc
ggcggtattattttctttttattcaggaaatcgaatcttgtgacaaacattgccaaagga
ttccttacccagcaagaggtatctgagtgggaggctgtcaaccggctgcatgggaggact
ggaacatattttgatggtcgtcaaatgctttttcatatgaaaaacctattcgcaaaagag
caagctatccttggtttgctgtacccaaatcttggtgaaccgtcggttttcaccaaaacc
aacaaggttgtcccagcgagtgaaaggtacaaactgttctttttggaccgtattctcgta
ccgccattacccctgaggctttcgtcaggcgtgagagtaaatgataatggtttgataata
cccgacgagcaaacacgtgctctttccgatatattggggtttgttgagcagattgagtgc
ttccacacattgagtgctaattctacaaacgggcgtagtttcatcaccgatgcgcagagg
gctgtgaatgagtcgaacctccgcaaccttcaacaaaaagtggatgagttttatgcagaa
atcataaatagctttgcgaagaaggagggtctcttccgcatgaatatgatgggaaagcgt
gtcaatcaggcctgccgttcggttatttcgcctgatccattcgttgaaccgaacgaagtg
cttttaccaagaccactagcccgtgctttgtcgtttcctgagcaagttacttgtttcgca
ccagctcgcatgaatctgttgaaacactgcgttgtgaacgggccacgtaaataccccggc
gccacacacattgagcttcgtcatgccaacggtgagatccgttctgttgaccttaatgta
cccgagcagacacggcggcagcatgctgcaaggttttttgcgatggcccagagtggtgtg
acgttaatcgtttatcggcacattcttaatggtgatcgcgttatattcaatcgccaaccc
acactccataaaccgagtatgatggggtatcgcgtgaaggtactttcagggtccaaaact
attcgctttcactacgtgaatggtaactcctttaacgcagacttcgatggtgatgaaatg
aacgttcacgttccgcaaagcattgagacgcgggccgaggttgaaacgctgatggacgca
aacatcaactaccttgtgccgacgtctggcagaccgatccgtggtcttatacaggatcat
gtggcggcaggcgttttggtaacgttgcgcgacaagttctttgatcactccacctttgtg
caactggtgtacaatggcgtcggtccatacattcaggaaaacgttggcataactcttgct
gaacttattcccattccagcaattctcatgcctcggccaatgtggactggaaaacagctg
atatctgtgatggttcggttttctagtggattgtctgccgcaagcgactgtggacgggag
atagagggcggaatcacactcaaaggcacttcacaaatccaacccagcgcatttgacaga
ataccggcgggtagctgcgacgcagtgcgtgtgaaatccggggcagtggttgattctact
gtcatgtttgcgaacagtgagctaattaccggattcatgtgtaagaagcagcttggagcc
tctaatatgtctgccccccaccatgtctatgagctttacgggccacataggacgggacag
ttgttcgctgcttttggccgtgttctcctgctggctctacgaaaggagggtctttctctt
gcgatggacgatatgttcctcgttgatgaagagcgccgatgcgacttgcttaggaagctt
gatgatatagcgttggatgttccagatgaagaggccactgctgcaccgatgattgcagat
tatgcaacaaagattcagcaggagtttgttccgcagcgcatgctggtgcccttcccaaag
aatcatcttcttctgatgactatttcaggtgcgaaagggagcaacctgaacgccacacaa
atgtcactgcagttgggccagcagctgttcgatggactgcgcgttaagcgtatgaactct
tccaagacgcttccgtccttcttcactaatgaaaagcgtgcccggtcctttgggtttgct
atgggttccttcgcctcagggatcagaccagccgagtataccattcatgcaatggctggt
cgcgacggccttattgataccgctgtgaaaacctcccgttctggtcacttgcaacgctgc
ctcatcaaaggtctcgaaagccttgtggtccattgggaccgtacggtgcgtgactccaac
ggcagcgttatccaatttatgtatgggggtgacggacttgacccgtgcaaggcttctacg
cttacggcgtgggagatgatgaaggataacgtagttgatgtttccaagcgattcggagga
gatgcctcagaaagtgttgccggtgccgaggatggcgcggcggcagggttggaggagatg
cgaaacgaagatggaaagcccacgactgaggccgtgcaaaatgcgcatatggagcagcaa
ctatccacgtatcctcttccggcctcactcgacaagagtttgtctgagtatctgtgcaaa
aaagcagatttcccgctcttccgcaaggtgtcgacgctagcccgttgggatgcgaaacag
cagctaaaagagaggttacagcaaaggcgccagaagtgggttggtgccttcgaaaaaacg
cttgcagacattactgcccgcaggcgtctgtgggcattgtgcgaacccggtgagcccgtt
ggcctccttgcagcgcaagcagctggtgagccgtcaacacagatgaccctcaacacattc
cacactgctggttcaactgtctcccacgtgacggagggtattcctcgactccgcgagtta
ctgatctacgcctccgttaataaggcggctgttgttgtacccgttactaatgctacagag
gaagacgagaaagtaatcgccaaaatgcttcgtgcaggtgtcgccgcaaaactgaccgac
tgtctcgcgaaggtcacagatggcgctggtggccaaagcgcttccagctcgatgcagcgg
aacttaaacactggctttggtaagggctaccactatcacgttgcgcgaggccgcactggt
atggtgattacggtgtctttcctgttttcgcgctcgtgtttggaggagttgcgtaagcgc
atgtgtatgtcaccatctgaacatcgacaatcttttactgaagcactaaagaatgttgtg
cggctcatcatgaggtcactgagcgccgttccacgcgagaaggaaagcggtgacggttca
gggaacactggagggatgaaagggggaagtgggcgcgccgacaggaagagaaagcgatca
ggcccggacgatggcggtggtcctcttgggggtactttcggagacgaaattatgcgcatt
gaagagggaaccgattctgatgatggcatgagcgagaggagcagtataggtgggggtcgg
gctggctcggaggtctcatctctacactcggatggaaccgataccaggggcatagcagga
agcgatacgggcgggccgcagcgacggaggggctctgttgaaagtggccgcggtgacgat
gcttctgacagtgaggcagctgaccccgacttatatgccagacgaagtggctctccggcg
agggatgcggaggatggagatgagatgcaggatcgggacggcacggattggggaggaacg
tcgatgcaaggtgtggtgggatatgacaacttcccagagattcacatgagtttcaccaag
tcaaatttcggtgctgttattgctccccttagtactgctgcagcggcccgagatggggtt
gtgcaactacacgaagactttttcatagttaatgctgtgctgcgcacgccctcggacgtc
attgccgtcattccggacgttgtggataatgctttggaggcgcagagaatgccctcgtgg
ttacctcaattcgggtccctcactttcactcgactgaaagataaaggatctggccagctt
gttttccaaggacctggctcgacaatgcggaatgtgatgtctttcctttcccttttcacc
gttggcataaaatcgataaaacttcaccaagcttgctccactgatattcgggatatggga
acatacttcggcattgagtctggatacgctgcgctttacgatgagctcaataaactattc
aaccgctacaatgtcgacccgcggcacttgtcgctcatcgccgatacgtctacccaccga
gggcgatgggagaacttcaatttcactggtgtcatatcaacgagcgcgagcccactgttt
cagatgacatttgcctcgtcgaagcgctggttgcacagagcggtgagtcggggaatgagt
gacgacctcgagtcctttagttctgccatcatggtgggggaacgccctcgtgtgggaacg
gcgtccgtgcggctctcgactgatacggcgattttgcgggatgtgctcgagaggaacttt
gcataa
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