Trypanosoma brucei brucei: Tb927.8.6690
Help
Entry
Tb927.8.6690 CDS
T01013
Name
(RefSeq) ATP-dependent DEAD/H DNA helicase recQ, putative
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03440
Homologous recombination
tbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tb927.8.6690
03460 Fanconi anemia pathway
Tb927.8.6690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbr03032
]
Tb927.8.6690
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb927.8.6690
Enzymes [BR:
tbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tb927.8.6690
DNA replication proteins [BR:
tbr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
Tb927.8.6690
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
Tb927.8.6690
Bloom's syndrome complex (BTR)
Tb927.8.6690
FA (Fanconi anemia) pathway
Tb927.8.6690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Se_S_carrier
EF_HD
Motif
Other DBs
NCBI-GeneID:
3659682
NCBI-ProteinID:
XP_847499
UniProt:
Q57TU4
LinkDB
All DBs
Position
8:complement(1934721..1939367)
Genome browser
AA seq
1548 aa
AA seq
DB search
MDKDLSCVLDKWRPLVVSATAALVKNDPLPRGLPPVQSSSESNPQPREEGARKLFAAGPG
AFPAPTNHACDMTQSVCVYPDPNTTVDPVNTNSNAIAATAGSATITAARTTSVVAALATA
STSVEVAGRPTVPHDVKRCVATANTQKQSFNSGGGNAERFTVQTDVALQGSDGGRPVASS
SLPSFPAPSVGSSAQPLSELKANLSEVIEEIHRQRRYRDDMLLRENEECDTSEVVEEADR
KLAALEVLFANLRQRQRELLGRNPNVSLPHVVATSSKPPGSVSGTLSSASGANGTRVPLD
SNGFYSAAVPTQVSAPVFVSPSPGYAGAAFTHSGERGVAPHQLPSVVESSGGAFGEGNGA
HDAFAAAGRGGEVFSGVGALRTATEEVVEGKVAVYSAQFKGGNNPNRFTWESCERELLDA
SLHGSNQDPVSIAKASTGEFSGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRD
VFVLLPTGGGKSLCYQLPALLPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTL
DAPRRDLFNEWSSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQ
WGHDFRPDYRKLAALKHHFPQVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNL
KYSVQRITSKAGSTVAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADA
SEKNEKQEQWTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGL
SSKCFLLFAAGDRQRHEQMICGSKDSQTSMLSLCHMVGYTLNDVHCRRMQQLSYFGEHVS
DHFCLTAPGDVEICDNCASRKEEGWEPEMIDVTSILIDFFNITIYIGSLTQKQLIAVYRG
TSDVGNIVERRLRQKGAPPEYRKGSRHSKVLLGRVLNEGITLGVFKARFERLTEFGVCAY
LDPGDSEGIKILNSMKTGQRKIQLVVRGEKRVRANRERESTIASDAVAVGERKGKSNKKD
AGRNRKSASTRRGSGEQFEDDEDDDDVADDQARRPQLRSSRHAVARTSSKRKGVRDNELI
LGDCEGLASTSLTGRSSNNTVVIDDVTDGDASSLSEANSSSSQASPSCVEVIQQLGRKRS
RANNNSSDRSTESPPALPSRVTGAAAGPLRDKGKRRTSKSKSANALGSKSFTLADAQLEN
IKASFLLELEALLRKLAENSDGGRKYHVMSRKTMETLAATLTEQGWGSVSQFSDLEGFGK
NKVKKFGVDILRLYRKFRNEHIGDVGLLTGLEEDMLLQTTTVIADRHRLSRGSPSAGRTV
DESEENTGEHTPWKGNKPPLLQGSVTPSDSDVTPQKTSVTTPYQQGSPGGDPVREGSLPT
GSAPPVPMGRPSAPKKTMFKMMAAAPTNAEPQPSQQLLNNPTLEGNTLNECELPIRRTPL
AESPELLSSYTQMATPLPLPGQSNRQSPSATAFECASRGGNACLPHPEEQQPKVDIMSVD
YLMQMCDESLKLNALGPPAGVVPWASPDPVLQKPRRDTPPEVFTVDSQ
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagatttaagttgcgtcttggataagtggcgcccacttgtagtcagcgccacg
gcggccctagtgaagaacgacccactacctcgtggtctaccgcctgtacaatccagtagt
gagtcgaacccgcagcctcgtgaggaaggggcacggaaattgtttgccgctggtcccggt
gcttttccggctcccacgaatcatgcttgcgacatgacgcagagtgtgtgcgtttatccg
gatcccaacactacagtagatcctgttaataccaattctaatgccatcgcggctactgct
ggtagtgcaactattaccgcggcgagaactacaagtgtggttgccgctctcgccaccgcc
tccacaagcgttgaagtggcaggaagaccgactgtaccgcatgatgtgaaaaggtgtgtt
gcgactgcaaatactcagaaacaatcttttaacagtggcggagggaatgctgaacgattt
acagtgcagactgatgtggcactgcagggttctgacgggggaaggcctgtcgcttcctct
tccttaccttcgtttcctgcaccctctgtgggctcttcagcacaaccgctatcggaattg
aaggcaaatttgtcggaggtgatagaggaaatccaccgtcaaaggagataccgtgatgat
atgctattacgggagaatgaggagtgtgacactagcgaggtcgtggaggaggctgaccgc
aaattggcggcactagaggtgctattcgccaacctaagacaacggcagcgagagcttcta
ggacgtaaccccaatgtctctcttcctcacgtcgttgccacaagtagtaaaccccccggt
tctgtttctggcactttgagttctgcaagtggtgcgaatggcacacgcgttccgcttgat
tctaatggcttttattcagcggcagtgcctactcaggtctccgctcctgtatttgtatcg
ccctctccggggtacgctggggcggccttcacccatagcggggagcgtggtgtcgcaccc
caccagcttccatcagtagtggagtccagtggtggtgcattcggtgagggaaatggtgct
cacgatgcatttgctgcagcgggacggggtggtgaagtattttctggtgtaggggcactg
cgcacagccacagaagaagtggttgaaggcaaggtagctgtttactccgctcagtttaaa
ggaggcaataacccaaatcgcttcacgtgggaatcatgtgagagggagcttctggacgca
tcgctgcacggttccaaccaggaccctgttagcatcgctaaagcgtccacgggggagttt
tccggggagcattatccgtggtcggaagagctgcgtcgaaccatggttgatgttttcggt
ctccacaatttccgtttccttcagttggagattatgaatgcatgtatggccaatcgtgac
gtgttcgtgctcttgccaaccggaggaggcaagtctctctgctaccaactaccggcgctg
ttaccaaatccggcgaaagtcaccattgtaatatccccccttgtttctctgattcaggat
caggtctacgcgctccgcgcctatgaccttccagctatggcgttaactggtcagacctta
gatgcaccaaggcgagacctctttaatgagtggagttcgggccgtattgtttgcacactt
gtgtatgtaacaccagaatacttcggccgcagcgaccatttcgtgcagtcactcaaaagc
ctcgaaaaccgtggactattgaaccgatttgttgtggatgaggcgcactgcgtctcgcaa
tggggtcacgacttccgtccggattaccgtaagttggcggcactgaagcaccactttccc
caagtccctatttccgcactcaccgccacagcaactgacacggtgcagagggacatcata
cagacacttggccttcacaatgccgtctcgttcaagggttcatttaatcgacataacctt
aagtactccgtgcagagaattacaagtaaggcgggatctaccgtggcagaaattattaag
aaaaatttccccccacggtcttgtggcatcgtgtattgtatttccaagaaggactgcgaa
gagatggcagcagttctacggaaagagggtatccgcgcatcttattaccacgctgacgca
tctgagaagaatgaaaagcaggagcagtggacaagggacgagctgcaggttctctgcgcg
acggttgcgtttggtatggggatcaacaagcccgatgtgcgttttgtcatccatgcggct
atgcccaagtccattgaggggtactatcaagagagtggacgggcgggccgcgatggactt
tcatcaaagtgcttcttactctttgcagcgggtgacaggcaacgccatgaacagatgata
tgcggttcaaaagattctcaaacttctatgctttcgttgtgccatatggtgggttacacc
ttgaatgatgtacattgccggagaatgcaacagttgagttactttggtgagcatgtcagc
gatcacttttgcctaacagcacctggggatgtggagatatgtgataactgcgcaagcagg
aaagaggagggatgggaacctgagatgatcgacgtcacgagtattcttatagacttcttc
aacattaccatatacattggctctctaactcaaaaacagctaattgcagtataccgcggc
acgtcggacgtcgggaacattgtggagagacgcctacgacagaagggtgccccgccagag
tatcggaaaggttcacgtcactccaaggtgttactgggacgtgtattgaatgagggtatt
actctaggagtgtttaaggcgcgattcgagcggctgacagagttcggagtatgcgcatac
cttgacccaggggattcagagggcatcaaaattttgaacagtatgaagacgggacaacgg
aagattcaacttgtcgtacggggtgagaaacgcgtgcgagctaatagggaacgtgagtcg
acgatcgcttccgatgcggtggccgttggtgaacgcaagggtaagtcgaataaaaaggac
gcagggcgcaaccgaaagtccgcttcaactagacggggtagtggggagcagtttgaagat
gatgaggatgatgatgatgtagcggatgaccaggccagaagaccacaactacgatccagc
agacatgctgttgctagaacttcatctaagcggaaaggggtccgtgataatgagcttatt
ctgggcgactgtgagggtttagcttccacttctttgactggcaggtctagtaacaacacc
gttgttattgatgacgtcaccgatggcgatgcttcaagcctttccgaagcgaattcttcc
tcatcacaggcgtcgccttcttgtgtggaagtgatacaacaactgggaaggaagcgcagt
cgagccaataacaactccagtgatcgatcgactgagtcgccaccggcactcccatctcga
gtgacgggcgctgccgcaggcccccttcgcgacaaggggaaaaggcgtacaagtaaaagc
aaaagtgcgaatgcgttgggatctaaatcgttcacacttgctgacgcacagttggagaac
attaaggcttcctttcttttggagctggaagcgcttttgcgaaagctggctgagaactct
gatggaggtcggaagtaccacgtgatgagtaggaagactatggaaacgttggcagccacg
ctcaccgagcaagggtggggttctgtgagccagttcagcgatttggaaggctttggtaag
aacaaagtgaaaaagtttggtgtcgatatattgcgactgtacaggaagttccgtaatgag
cacattggagatgtcggcttgttgacagggttggaggaggacatgttgttacagacgact
actgtgatagcggaccggcaccgcctctcacgtggatcgccgagtgcgggtcgaactgtt
gacgaaagtgaagaaaatacgggagagcataccccatggaaaggcaacaagcccccactg
cttcagggttcagtcacgccatcagattcagatgtcaccccgcagaagacgtctgtgacg
actccataccagcaggggtcgccaggcggagaccccgtcagagagggatcattgcccact
ggatcagcgcctccagtgccgatgggaaggccgtcagcaccaaagaaaacgatgttcaag
atgatggcagcagcacctacaaatgcggagccacagccgagccagcagctgttgaataac
cccacgctggagggtaacacgctaaatgagtgtgagttgccgattcgccgcaccccattg
gccgaatctccagaacttttatcaagttatacgcaaatggcaaccccgcttccacttcca
gggcaatcaaacagacaatctccatcagcaaccgcgttcgagtgtgcctcgcggggcggg
aacgcgtgtctaccgcacccggaagagcagcagcccaaagtagatattatgagtgtggac
tacttaatgcagatgtgcgatgaatccctaaagcttaacgcgttagggcctccggcaggt
gtagtgccatgggcttcacctgatccggttcttcaaaagccgagacgtgatactccccca
gaagtcttcacagttgattcgcagtga
DBGET
integrated database retrieval system
