Thermococcus barossii: A3L01_00800
Help
Entry
A3L01_00800 CDS
T05081
Name
(GenBank) exonuclease
KO
K11600
exosome complex component RRP41
Organism
tbs
Thermococcus barossii
Pathway
tbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L01_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbs03019
]
A3L01_00800
Messenger RNA biogenesis [BR:
tbs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A3L01_00800
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
A3L01_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
EF-hand_1
Pinin_SDK_N
Motif
Other DBs
NCBI-ProteinID:
ASJ03974
UniProt:
A0A2Z2MJJ7
LinkDB
All DBs
Position
144938..145687
Genome browser
AA seq
249 aa
AA seq
DB search
MMGKPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPR
EIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPR
TAIDIFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIEGEIVLDLNKDED
NYGEADVPVAIMPLKNDITLLQMDGYLTREEFVEAVKLAIKGAKAVYQKQREALKVKYLK
IAEEVGGGD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcaagccagagggtttaaagctcatagatgagaacgggagaaggatagacggt
agaaagaagtacgaactccggcctataaagatggaagtcggcgtgctgaagaacgccgac
ggttctgcctacgttgaatggggcaagaacaaggttctcgccgccgtttacgggccgagg
gaaattcatcccaagcaccttcagaggccggacagggcaatcctgcgcgtccgctacaac
atggcacccttcagcgtggaggagcgcaagaagcccggtccggacaggaggagcgttgag
ataagcaaggtcataaggggcgcgcttgaaccggcgcttatccttgagatgttccccagg
actgccatagacatcttcatcgaagtccttcaggccgacgccggaacgagggttgccggt
ataaccgccgcatctctggccctggccgatgcgggcgttccgatgagggacctcgtggcg
gcgtgcgccgcggggaagatagagggcgaaatagtcctcgacctcaacaaggacgaggac
aactacggtgaagcagatgtgcctgttgcgataatgcccctcaagaacgatataacgctc
cttcagatggatggctatctcaccagagaggagtttgttgaggcggtgaagctggcaatc
aagggggcaaaggcagtctaccagaagcagcgcgaggcgctgaaggtcaagtatctcaag
atagcggaggaggtcggtggaggtgactga
DBGET
integrated database retrieval system
