Thermococcus barossii: A3L01_00805
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Entry
A3L01_00805 CDS
T05081
Name
(GenBank) RNA-binding protein
KO
K12589
exosome complex component RRP42
Organism
tbs
Thermococcus barossii
Pathway
tbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L01_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbs03019
]
A3L01_00805
Messenger RNA biogenesis [BR:
tbs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A3L01_00805
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
A3L01_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Mon2_C
Motif
Other DBs
NCBI-ProteinID:
ASJ03975
UniProt:
A0A2Z2MGX6
LinkDB
All DBs
Position
145689..146498
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AA seq
269 aa
AA seq
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MEVMASIMRDHILSLLKEGRRIDGRGLEDYRDLEVRVNVIEKAEGSAWVRLGNTQVLVGI
KVDMGEPFPDLPEKGVITTNVELVPLASPSFEPGPPDENAIELARVVDRGIRESQAVELE
KLVIVPGKLVRVVFIDVHVLDHDGNLLDASGIGAIAALLSTKMPKVVYDEENDEVQVLDE
YEPLPVSRVPIPVTIAKIGGNLLADPNLDEERVMDGRITITTDENGMISSVQKSEGGSFK
LEEVMYAVDLALKKAAEIREKVLEAVGAE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatggccagcataatgcgcgaccacatcctgagccttcttaaggagggcagg
cgcatagacggccgcggtcttgaggactatcgcgaccttgaggtcagggtcaacgtcatt
gaaaaggccgagggctcggcgtgggtgaggctcggcaacacccaggttctcgtcggcata
aaggtggacatgggcgagccgttcccggaccttcctgagaagggcgtcataacgaccaac
gtcgagctcgtgcctctcgcctccccgagctttgaacccggcccgcccgacgagaatgcc
atagagctggcgcgtgtcgtggacaggggtataagggagagtcaagctgtggagcttgag
aagctggtcatagtccctggcaagctcgtccgtgtagtcttcatagacgtccacgtcctt
gaccacgacggaaacctgctggacgccagtggaatcggtgccatcgccgcccttctgagc
acgaagatgccgaaggtcgtctacgacgaggagaacgacgaggttcaggttctcgatgag
tacgagccgcttccggtgagcagggtgccgattcccgtgacaatagccaaaatcggcggc
aacctccttgccgaccccaacctcgacgaggagcgcgtcatggacggcaggataaccata
accaccgacgagaacggcatgatttcctcggttcagaagagcgagggcggcagctttaag
cttgaggaggttatgtacgcggttgaccttgccctgaagaaggccgctgagatcagggag
aaggttcttgaggccgtaggggccgagtga
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