Thermococcus barossii: A3L01_01960
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Entry
A3L01_01960 CDS
T05081
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tbs
Thermococcus barossii
Pathway
tbs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L01_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbs03021
]
A3L01_01960
Enzymes [BR:
tbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L01_01960
Transcription machinery [BR:
tbs03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
A3L01_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
Auto_anti-p27
Zn_ribbon_NOB1
RNA_pol_Rpb2_45
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
ASJ04193
UniProt:
A0A2Z2MEY2
LinkDB
All DBs
Position
complement(348925..352293)
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDYGMQKVIDEFGGIKPDIP
DFEVKFGKVRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVVNGIAQEAVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNRVIAKCFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGVLSDK
EIVEAVSDDPRIQQVLFDNLEDASDITTQEEALDYIGKLALPGQPKEYRLRRAQHIIDNN
LLPHMGVEEKDRRAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLSLMAQITTGIPEEEVRDYLSRLGVIPIEEQRPNPELWRVYLNGVLIGTVEDGEGLVNR
IRTDRRSGRISDVINVALYQDEEVREIYVNSDDGRVRRPLIIVENGQPRLTKEHVEGIKN
GTLTWSDLVKMGVIEYLDAEEEENAYVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGLGWANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYGGYNMEDAVIMNKASIERGLARSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVEGKDVLVGRTSPPRFLEEQSGLGGIIIQERRETSV
AVRPSERGIVDKVILTETGDGTKLVKVTVRDLRIPEFGDKFASRHGQKGVIGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVAALKGRRVDGTAFIGEPEEKLRKEL
EELGFKHSGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEEKISKVEMSYAFKLLLDELKAMGIRPSLNIVDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaccgaccgttgttgatgttactcccgacgacctctggctcgttatg
gaggcatactggaaggagaagggactggtgaggcagcatcttgactcttacaacgccttc
attgattacggcatgcagaaggtcatagacgagttcggcggcatcaagccggacatcccg
gacttcgaggtcaagtttggaaaggttcgcctcggcgagccggaattccaggaggcccag
ggccagaggaagcctctctacccgatggatgcccgcataaggaacctcacctactcggcc
ccgctgtacctcgaactcattcccgtcgttaacggcatagcccaggaggccgtggaggtt
cgcattggagaacttccgataatgctaaaatcgaaggcgtgcaggctttacggcctcagc
gatgaggagctgataaagctcggcgaagacccgaaggatcccggaggatacttcatcatc
aacggctctgagagggttatcgtctctatcgaagacctcgcccccaacaagaccctcgtt
gagagagacgagagacagaacagggtcatagccaagtgtttctcatacaggcacggctac
agggctttaatcaccgttgagaggagaaaggatggaattctctacgtcaacataccgaac
gttccgaggccggtcaagttcgtctacgtcatgcgcgcgctgggcgttctcagcgataag
gagatagttgaggctgtaagcgacgacccgaggatacagcaggttctcttcgacaacctt
gaggacgcgagcgacataaccacccaggaagaggcccttgactacataggcaagcttgcc
ctccccggccagcctaaggagtacaggctcagaagggcccagcacatcatagacaacaac
ctcctgccgcatatgggtgtcgaggagaaggacaggcgcgccaaggcctactacctcggc
atgatggccctcaaggttcttgagctttcccttggactgcgtggcgaggacgataaggac
cactacgctaacaagaggctcaagctggctggagaccttctgagggacctcttccgcgtt
gccttcggccagctcgtcaaggacatgcagtatcagatgaccaagacataccagaggaag
ggcgagcgctacaccttcgagaacatacagcgcttcgtgaggaactcgataagaccggac
gtgctgagcgagaggatcgagcacgccctcgccaccggcgcatggcccggcggaagaacc
ggtgtgagccagctcctcgacagaaccaactacatgtcaaccctttctcacctcaggcgc
gtcacttctccactcagcagggaccagccccacttcgaggcccgtgacctccacggaacc
cactggggaaggatatgcccgacggaaacgccggaaggtccgaactgtggtctcgtcaag
aacctctccctgatggcccagataaccaccggaatccctgaggaggaggtaagggactac
ctgagcagactcggagttatcccgatagaggagcagaggccaaaccccgagctctggcgc
gtctatctcaacggagtcctcatcggaaccgtcgaagatggagaaggactcgtgaacagg
ataaggacggacaggagaagcggaaggataagcgatgtcatcaacgtcgcactctaccag
gacgaggaggtcagagagatatacgttaacagcgatgatggccgcgttaggaggcctctc
ataatagttgagaatggccagccaaggctcaccaaggaacacgtcgagggaataaagaac
ggtaccctcacctggagcgatctcgttaagatgggggtcatcgaatacctcgatgccgaa
gaggaggagaacgcctacgtggcaacgtggccctgggaagttacggaggagcacacccac
cttgagctgatgccggctgccatactcggcattccggcctcactcgtcccgtatccggag
cacaacgcggccccgcgtaacacatatggagcgggtatggccaagcagagcctcggtctc
ggctgggccaacttcaggataagggttgacacccgcgggcacctcatgcactacccgcag
gttccgctcgtcaactcacgcataatgaaggcggtcggtttcgaggagaggccggcaggt
cagaactttgtcgttgccgtcctcagctacggcggctacaacatggaagacgcggttata
atgaacaaggcctcgatagagcgcggcctggcccgctcaacgttcttcagaacctatgaa
gctgaggagaagcgctacctcggtggtcagaccgaccgctttgaggttcccgacccgaca
atacagggctatctgggcgagaagtactacaggcacctcgacgaggacggcataatcttc
ccggagtcaaaggtcgagggtaaggacgtcctcgttggaagaacctcaccgccaaggttc
cttgaggagcagagcggccttggaggcataatcatccaggagaggcgtgaaacgagcgtt
gcggtgaggccaagcgagaggggcatcgtcgacaaggttattctaaccgagaccggcgac
ggaacaaagctcgtgaaggtgacggtgagagacctccgcattccggagttcggagacaag
ttcgcatcgaggcacggccagaagggtgttatcggcctcatcgtcccgcaggaggacatg
ccttggaccgagagcggaatcgttccggacctcatcgtcaacccgcacggtatcccgagc
cgtatgaccgtcggacagctcatagaggcaataggcgggaaggtcgcggcgctgaaggga
aggagggttgacggcactgccttcatcggagagccggaggagaagctcagaaaggagctt
gaggagctcggcttcaagcacagcggaagggaggtcatgtacgacggcataaccggaagg
cgccttgaggcggacatattcgttggcgtcatctactaccagaggctccaccacatggtc
gccgacaagatgcacgcgaggagcaggggtccggtgcaggttctcaccaagcagccaacc
gagggaagggccagggaaggtggtctcaggttcggtgagatggagcgtgacgttctcatc
ggccatggtgctgcaatgctgctcatagagcgtctcctcgaagagagcgataagaccgag
gtatgggtctgcgagagctgtggccacttggcactcgaagacaagcgtcgtggcaaggtc
tactgcccggtctgtggagaggaagagaaaataagcaaggtggagatgagctacgccttc
aagctgctgctggacgagctgaaggcaatgggaataaggccgtctctcaacatagttgat
agggtgtga
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integrated database retrieval system
