KEGG   Thermococcus barossii: A3L01_04880
Entry
A3L01_04880       CDS       T05081                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tbs  Thermococcus barossii
Pathway
tbs03030  DNA replication
tbs03410  Base excision repair
tbs03420  Nucleotide excision repair
tbs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tbs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L01_04880
   03410 Base excision repair
    A3L01_04880
   03420 Nucleotide excision repair
    A3L01_04880
   03430 Mismatch repair
    A3L01_04880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbs03032]
    A3L01_04880
   03400 DNA repair and recombination proteins [BR:tbs03400]
    A3L01_04880
DNA replication proteins [BR:tbs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A3L01_04880
DNA repair and recombination proteins [BR:tbs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3L01_04880
   MMR (mismatch excision repair)
    Other MMR factors
     A3L01_04880
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    A3L01_04880
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C Rad9 Hus1 Chalcone_2
Other DBs
NCBI-ProteinID: ASJ04730
UniProt: A0A2Z2MDL5
LinkDB
Position
888653..889402
AA seq 249 aa
MPFEIVFDGAKDFADLIATASNLIDEAAFKITEEGISMRAMDPSRVVLIDLNLPESIFSK
YEVEEEETIGINMDHFKKILKRGKNKDTLILRKGEENFLEVTFEGTAKRTFKLPLIEVEE
LELDLPELPFTAKVVVLGEVLKEAVKDASLVSDAIKFIASESEFVMKAEGETNEVEIRLT
LEDEGLLDLEVEEETKSAYGISYLADMIKGIGKADEVIIRFGNEMPLQMEYPIRDEGKLI
FLLAPRVED
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccgttcgagatagtttttgatggtgccaaggatttcgccgatcttatagccaccgca
agcaacctcattgatgaggctgccttcaagataactgaggaaggcataagcatgcgtgcc
atggacccgagcagggtcgttttgatagacctcaacctcccggagagcatcttctccaag
tatgaggtggaggaagaagaaaccattggaatcaacatggaccacttcaagaagatactc
aagcgcggcaagaacaaggacacactcatcctcaggaagggtgaggagaactttctcgaa
gtcacgtttgaaggcacggccaaaaggaccttcaaactcccgctgattgaagttgaggag
cttgagctcgacctcccagagcttcccttcaccgccaaggtcgtcgttctcggagaggtt
ctcaaggaagccgttaaggacgcttccctcgtcagcgatgccataaagttcattgccagc
gagagcgagttcgtcatgaaggcggagggcgaaaccaacgaggtcgagataaggctcacc
cttgaggacgaaggcttgctcgaccttgaggttgaggaggaaaccaagagcgcctacgga
atcagctaccttgcggacatgataaagggcatcggcaaagccgatgaggttataatccgc
ttcggcaacgagatgcccctccagatggagtacccgataagggacgagggcaagctgata
ttcctcctcgctccgcgcgttgaggactga

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