Thermococcus barossii: A3L01_05675
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Entry
A3L01_05675 CDS
T05081
Name
(GenBank) RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tbs
Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbs03019
]
A3L01_05675
Messenger RNA biogenesis [BR:
tbs03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
A3L01_05675
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
ATPase
Motif
Other DBs
NCBI-ProteinID:
ASJ04876
UniProt:
A0A2Z2MG41
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All DBs
Position
complement(1053055..1055676)
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AA seq
873 aa
AA seq
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MLFVVRPGRKKNELEAFFIESEPEKLTAMKNLKADRIYRFIMREGRLFKVLEGSNYRNPK
EIEKLLRQARIVLVNADEWEDYFRRRLQNKRVEKAELCRLCLLEGRITVLTPGNRIKYRD
EYICERCAEDELKRELRFRFKSVAMFDQAKKLLERFRDLDKVLYAFDPRFDPTRHPEITK
WDELKAKHVRVEKLKVDELNLPEKFKSVLKAEGVNELLPVQSLAVKNGLLEGENLLVVSA
TASGKTLIGELAGVPGAMEGKKLLFLVPLVALANQKYEDFRRRYSKLGLRVAIRVGMSRI
KTRDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGNVGTIVIDEIHTLDDEERGPRLDG
LIARLRKLYPKAQFIGLSATVGNPEELAKELGLKLVLYDERPVDLERHIIIARNESEKWR
HIAVLCRAEASRKSRQGYRGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPYRQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLTVREFHQMLGRAGRPLYH
EKGRVYLIVEPGRKYSAQMESSEDEVAFKLLTAPIEPVMVEWSDELEQDNVLAHSCVFNH
LDVIEDVQSKCLGANQSAEKVLEKLSGYGFVRLKGSLVDVTPYGRAVSMSFLLPREATFV
RGNLGKKPPQGIAVKLLPFENLYLSGTLQRELEGAVRGRLSANVFSPSFASILEELDKVI
PELSPNAAERLFTIYQEFFMCPEDDCTDYAMERVSNLIIELRRNGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFGVRTAESEAKLLRREIEEGRTIRGDHGGGRG
HQGPLDWRGREGRKARGRSDQPQGRHRNGRRNG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgttgtgagaccggggagaaagaaaaacgagctggaagcgtttttcatcgag
agcgagccggaaaagctcaccgcgatgaagaacctgaaagctgacaggatataccgcttt
ataatgcgcgagggaaggctcttcaaggttctggagggaagcaactaccgcaatccgaag
gagatcgagaagctcctccgccaggcaagaatcgtcctcgtcaatgccgatgagtgggag
gactacttcaggcggaggctccagaacaagcgcgtagagaaggccgagctgtgccgcctc
tgcctgctggaaggtaggataacagttctcacccccggaaaccgaataaaataccgggac
gagtacatctgcgagcgctgtgccgaggacgagctgaaaagggagcttcgcttcaggttt
aagagcgtggccatgtttgaccaggcgaagaagctcctcgaacgctttagagatcttgac
aaggttctctacgccttcgacccgcgcttcgacccgacgaggcaccccgagataaccaag
tgggacgagctgaaggcaaagcacgtaagagttgagaagctcaaagtggacgagctgaat
ctccccgagaagtttaaatccgttctcaaggcggaaggtgttaacgagctcctcccggtt
cagagtctggccgttaaaaacggcctcctcgaaggggagaacctcctcgtcgtttctgcc
accgccagcggtaagacgctcataggtgagctggcaggcgttccaggggcgatggagggg
aaaaagcttctcttcctcgttccgctcgttgccttggcaaaccagaagtacgaggacttc
aggaggaggtactccaaactcggccttcgtgtggcgataagggttggcatgagcaggatt
aagacgagggacgaactggtggtcgtggatacaggcatagacgccgacatcatagtggga
acctacgagggcattgactacctcctcagagcggggaggaagataggaaacgtggggacg
atcgttatagacgagattcacaccctcgacgacgaggagcgcggaccgaggcttgatggc
ctgatagcgaggctgagaaagctctacccaaaggctcagttcatagggctgagcgccacc
gtcggaaaccccgaggagcttgccaaagagcttggcttgaagctcgtcctctacgacgag
aggcccgtcgatttggagaggcacataatcatcgcccgcaatgaatcggagaagtggagg
cacatagcggttctgtgccgtgcagaggcgagcaggaagtcaaggcagggctacaggggt
cagagcatagtcttcaccttctcgcgcaagaggacgcacgagcttgccgcctacctcacg
agcaaaggcctcaaagccaagccctaccactcaggtttgccttacaggcagaggaaactc
accgagatggagtttttagcccagaggctcgacgtggtagttacaacggccgctttgggg
gcgggcgttgattttccggcatcgcaggttatcttcgagagcctcgccatgggcaacaag
tggctcaccgttcgggagttccaccagatgctcggccgcgccggaaggccgctctaccac
gagaagggcagggtttacctgatcgtggaaccggggaggaagtactcggcccagatggag
agctccgaggacgaggttgcgttcaagcttttaacagctccaatcgagcccgtgatggtg
gaatggagcgacgagctcgaacaggacaatgttctggcccattcctgcgtcttcaatcat
cttgacgtcattgaggacgtgcaaagtaaatgtctcggcgccaatcagagtgccgagaag
gttctggagaagctcagcgggtacggcttcgtccgcctcaagggctccctcgtcgatgtc
accccctacggaagggccgtaagcatgagctttttgctccccagggaggcgacctttgta
aggggcaaccttggaaagaagccaccccaggggatagccgtcaagctactccccttcgag
aacctgtatttgagcggaacgctccagagggagcttgagggtgcagttagggggaggctg
agtgcgaatgtcttctccccgagcttcgcgtcgattctggaagagctcgataaagttatc
ccagaactcagccccaacgcggcggagaggctgttcacgatctatcaggagttctttatg
tgtccagaggacgactgcaccgactacgcgatggagcgcgttagcaacctgataatcgag
ctgaggaggaacggcaagcacccaacccagatagcggagcacttcaggaaggtctacggc
ctcatcgtttacccgggcgacgtcttcacgtggctcgacggaatagtcagaaagcttgaa
gccatcgagaggatagcaagggttttcggggtaaggactgccgagagtgaggcgaagctt
ctcaggagggagatcgaggagggcaggacaatacgaggggaccatgggggcggaagagga
caccaagggcccttagattggaggggccgggaaggcaggaaagctcggggaaggagtgac
caaccacagggaaggcacaggaatggaaggaggaacggctga
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