Thermococcus barossii: A3L01_06805
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Entry
A3L01_06805 CDS
T05081
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tbs
Thermococcus barossii
Pathway
tbs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L01_06805 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbs03021
]
A3L01_06805 (tfb)
Transcription machinery [BR:
tbs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L01_06805 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L01_06805 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
RUBY_RBDX
FYDLN_acid
Cyclin_N
Trm112p
Zn_Ribbon_Prim
Zn_ribbon_tTFIIB
Zn_ribbon_IS1595
HTH_Tnp_ISL3
Cyclin_C
FtrD-like
Zn_ribbon_LysW
HTH_AsnC-type
YceG
DZR
Auto_anti-p27
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ASJ05089
UniProt:
A0A2Z2MHX1
LinkDB
All DBs
Position
complement(1254042..1254953)
Genome browser
AA seq
303 aa
AA seq
DB search
MADKNVCPVCGSDKLFYDPRRGEIVCSVCGYVVQQNVIDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDRDIHGNQITGMYRTKMRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMMLPRRVKEVAASLYRKAVMKKLIRGRSIEGMVSAALYAACRMESIPRTLDE
IAAVSKVTKKEIGRSYRFLARGLGLNLRPTSPIEYVDRFGDALGVSQRTKKRAKEILQEA
IKRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataagaatgtttgtccggtttgcggctccgataagctgttttacgacccgagg
aggggcgaaatcgtctgttctgtctgcggttacgtcgttcagcagaacgtcattgatgag
ggccccgaatggcgtgcctttgatcccgaccagagggcaaagcgcgccagaaccggtgcg
cccatgactctgatgatccacgataagggtctctccaccgatatagactggcgcgacagg
gatatacacggcaaccagatcaccggaatgtaccgcacgaagatgagaaggctcagaatg
tggcagcgcaggatgaggataaacgatgccgccgagaggaacctcgcctttgccctgagc
gagctcgacaggatggcggcccagatgatgctgccaaggcgcgttaaggaggtagccgcc
tcactctaccgcaaggccgttatgaagaagctcatcaggggaaggtccatagagggcatg
gtttcagccgccctgtacgccgcatgcaggatggagagcatcccgagaacactggacgag
attgccgcggtttcgaaggtcacgaagaaggaaatcggcaggagctaccgcttcttggcc
agaggccttggcctgaacctcagaccaaccagcccaatagagtacgttgaccggtttggc
gatgcgctcggtgtgagtcagagaaccaaaaagcgcgccaaggagatacttcaggaggcc
atcaagaggggcatcaccagcggcaaaggccccacgggactcgctgccgctgccctctac
gtcgcgtccctgctggagggagagaagaagactcagcgcgaggtggcggaggtagcgcac
gtaacagaggtcacggtcaggaacaggtacaaggagctcgttgagaagctcaacataaac
gtcccgatatga
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