KEGG   Thermococcus barossii: A3L01_07820
Entry
A3L01_07820       CDS       T05081                                 
Name
(GenBank) tRNA-intron lyase
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
tbs  Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:tbs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tbs03016]
    A3L01_07820
Enzymes [BR:tbs01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     A3L01_07820
Transfer RNA biogenesis [BR:tbs03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    A3L01_07820
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N tRNA_int_end_N2 Sen15
Other DBs
NCBI-ProteinID: ASJ05274
UniProt: A0A2Z2MN56
LinkDB
Position
complement(1432770..1433285)
AA seq 171 aa
MKEPIVFQLSGDRVFSEREKAINQFYNKRYFGEVVNGKLFLSLIEAAYLMEKGKIRVFDG
DRELSFRELVDLGRKRDDQFDIKLLVYTDLRDRGYTVKSALKFGSHFRVYRRGMDEHSQW
LVWVVPENLRFSPNDITARVRVAHGVRKNMVMAVVDEDNDVVYYRIEWVKF
NT seq 516 nt   +upstreamnt  +downstreamnt
ttgaaggaacccatagtctttcagctcagcggcgacagggtcttcagcgagcgcgagaag
gcgataaaccagttctacaacaagcgctattttggagaggtcgtgaacgggaagctcttc
ctgtctctcatagaggccgcctacctgatggagaaaggaaagatacgggtcttcgacggt
gacagggagctctccttccgggagctggtggatctcggcaggaagcgcgacgaccagttc
gacataaagctcctcgtctacaccgacctgcgcgacaggggctacacggtgaagtctgcc
ctcaagttcggctcccacttcagggtttacaggcgtggaatggacgagcactcccagtgg
ttagtctgggtcgtcccggagaacctccgcttcagtccaaacgacatcacagccagagtt
agggtcgcccacggtgtcaggaagaacatggtaatggctgtggttgatgaggacaacgac
gtcgtctactacaggattgagtgggtgaagttttag

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