Thermococcus barossii: A3L01_07840
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Entry
A3L01_07840 CDS
T05081
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tbs
Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbs03400
]
A3L01_07840
DNA repair and recombination proteins [BR:
tbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3L01_07840
Archaeal homologous recombinant proteins
A3L01_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_13
ABC_tran
AAA_21
AAA_29
Nuf2_DHR10-like
SbcC_Walker_B
HMBD
ABC_ATPase
DUF1664
FtsK_SpoIIIE
HIP1_clath_bdg
Crescentin
EzrA
PUMA_CC
COG6_N
RsgA_GTPase
DUF6011
DUF5679
NTPase_P4
Laminin_II
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
ASJ05278
UniProt:
A0A2Z2MTH7
LinkDB
All DBs
Position
1437051..1439708
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AA seq
885 aa
AA seq
DB search
MRIEKLIIKDFRSHRLTKVSFTSGINLIVGQNGSGKSSLLDALLVGLYWPSKPKDLKKED
ILRVDGQSTEITVFFEKDGISYQLHRNITRGVAFAKYHDGSSWKHATETSQKAVRDWMEK
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDKYENAYKNLLEVRKEIEQRIK
SIEDYLKSTENLDELIGEMEKELSGALREINELSPQIPKLERELERVEKKLGELDELEKS
LNSLRLEIKEREGNRKRLETRVEGLEKRIAEGEERLHELEEKVREFNELREKAELYLRLS
NFRKRYTDEKARNEKLAENYRAQIEAIDERLAELSELEKRLGELEKEKKELERKLRRLEK
DAKAYEDARSISSQLEGLKKRLKLSREEIGDLAKEIEDARKRKEEIQRELEEINEERGGL
KNRVKERNRAIMELKKAKGKCPVCGRKLTEKHRKEIIEKYQAELKEVSLSLKELDERERK
LRGELVRIEKVLKRERELIAAKELLDQISGLEERLKEYDLEKLGKRAEEYERVKGELNRL
EGELESARTELEKVKALEKKRTLTEGKLRSVEEKLRKLDDELREMGFSGMEELDEKLAGL
EPTYRRYLELKGAESELQRERKNLERLRTELEGVKRELDEENRTLKRLTEALAEKERLYS
REEHERTREAFTSLREELAGKRARLEALERKRDETMENLGKLREEKERRREKARELDELR
KARERVQELREKVRRYKAMLKEGALARVGDIASEIFEELTEEKYSGVTVKAEENRIRLGV
LYNGREYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDDERRRRLVDIM
QRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgagaagctcataatcaaggacttccgttcccacaggctcacgaaggtcagc
ttcacgagcgggataaacctcatagtcggtcagaacggctcggggaagagctcactcctc
gatgcccttctcgttggtctctactggccgagcaagcctaaggacctcaaaaaggaggac
atactcagggtcgacggccagtccacggagataacggtgttcttcgagaaggacgggatc
agctaccagctccaccggaacataacccgcggggtggcctttgcaaagtaccacgacggg
agctcctggaagcacgccaccgagacgagccagaaggccgtgagggactggatggagaag
ctcgttccgtacgacgtgttcctcaacgcgatctacatccgccagggagagatagacgcc
atccttgagagcgacgagagcagggagaaagtcgtcaggcaggttctcggcctcgacaag
tacgagaacgcctacaagaacctcctggaagtccggaaggaaatcgaacaaaggataaaa
tcaatagaggactacctgaagagcacggaaaatctcgacgagctgatcggggagatggaa
aaggagctctcgggcgccctcagggagataaacgagctttcaccccagattccaaagctg
gagagggagcttgaaagagttgagaaaaagctcggggaactcgatgagctggagaaaagc
ctgaactccctccggcttgagattaaagagcgggagggcaacaggaagagactcgaaacc
agggttgagggtctggaaaagcgcatcgccgagggcgaggaacgcctgcacgagctggag
gagaaggtgagggagttcaacgagctcagggagaaggcggagctctatctcaggctctca
aacttcagaaagagatacaccgacgagaaggcgagaaacgagaagctcgccgagaactac
agggcgcagattgaggcgatagatgagcgcctcgccgaactgagtgaactggagaagcgc
ctgggggagctggaaaaggagaagaaggagctcgaaaggaaactccggagacttgaaaag
gacgccaaggcatacgaggatgccaggtccatctcgtcccagcttgagggcctcaaaaaa
cgtcttaagctttccagggaagagataggagacctggccaaggagatcgaggacgcgagg
aagaggaaagaggagatacagagggagctggaggagataaacgaagaacgcggaggcctg
aaaaaccgggtcaaggagaggaacagggccataatggagctgaagaaggcgaagggcaag
tgtcccgtctgcggcaggaagctgaccgagaagcaccgtaaggagataatcgagaagtac
caggccgagctcaaggaggtctccctgtctctgaaggagctcgacgagagggagagaaag
ctcaggggtgagctcgtcaggatagagaaggttctgaagagggagcgcgagctgatagcc
gcaaaagagctcctggaccagatatccggcctggaggagaggctgaaggagtacgacctt
gagaagctcgggaagagggcggaggaatacgagagggtgaagggcgagctgaacagactc
gaaggtgagctggaaagcgccaggacggagcttgaaaaggtgaaggccctcgaaaagaag
aggactctcacggaggggaagctcagatccgttgaggaaaagctcaggaagctcgatgac
gagctccgggaaatgggcttctctgggatggaggagcttgacgaaaaacttgccggcctt
gaaccgacctacaggcgctacctcgaactgaagggggcggaaagcgagctccagagggaa
aggaagaacctggaaaggctcaggacggaactggaaggcgtgaagagggagctggacgag
gagaacaggacgctgaaaaggctcacggaagcgctggcagagaaggagaggctctacagc
agggaggagcacgagaggaccagggaggcgtttacatcgctcagggaggagctggccggg
aagagggcccggctggaggcccttgagaggaagcgcgacgagacaatggagaacctcggg
aagctgagggaggagaaggaacgcaggagagagaaggcgagggaacttgacgagctcaga
aaggcccgcgagagggttcaggagctccgcgaaaaggtgcggcgctacaaggccatgctc
aaggaaggcgcgctggcgagggtcggggacatagccagcgagatattcgaagagctgacc
gaggagaagtactcgggggtcaccgtgaaggccgaggagaacaggataaggctcggggtg
ctctacaacggcagggaatacgggctcgggttcctcagcggtggggagaggatagccctc
ggcctggcgttccgcctggcgctgtcgctctacctggccggggagataagcctcctcatc
ctggacgagccgacgccgtacctcgacgacgagagaaggagaaggctcgtggacataatg
cagcgctacctgaggaagataccgcaggtcatagtcgtttcacacgatgaggagctgaag
gacgccgccgaccgcgtgataagggtcagccttgagaacggcgtttcggtggtcaaggaa
gtcgagctgggggtgtga
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