KEGG   Thermococcus barossii: A3L01_10150
Entry
A3L01_10150       CDS       T05081                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
tbs  Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:tbs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tbs03016]
    A3L01_10150
Enzymes [BR:tbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     A3L01_10150
Transfer RNA biogenesis [BR:tbs03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    A3L01_10150
SSDB
Motif
Pfam: LigT_PEase AKAP7_NLS 2_5_RNA_ligase2 TraC HGD-D DUF6304 DUF1045 STAS 2H-SAK
Other DBs
NCBI-ProteinID: ASJ05706
UniProt: A0A2Z2MIH7
LinkDB
Position
complement(1877212..1877766)
AA seq 184 aa
MRAFIAIEVSDEVRDNLLKAQERIGNKSAKIKFVERENFHVTLKFLGEIDEITAEEVKKA
LEEIAKKHRKHRVRVKGIGVFPNPNYVRVIWAGIENDEGIKAIAKDVEREMRRLGFKKEK
DFVAHITIGRVKFVRDKLELAMALKDLANEDFGEFEVKAIELKKSTLTPKGPIYETVARF
ELAE
NT seq 555 nt   +upstreamnt  +downstreamnt
atgagggcgttcatagccatagaggtcagcgacgaggttcgagataacctgctaaaggcc
caggagaggataggaaacaagtcggcaaagataaagttcgtcgagagggagaacttccac
gttaccctcaagttcctcggagagattgacgaaataacagcggaggaagtgaaaaaagcc
ctggaggagatagcgaagaagcacaggaagcaccgcgttcgcgttaagggcatcggtgtc
ttcccgaacccgaactacgtgagggtgatatgggccggaatagagaacgacgagggcata
aaggccatagcaaaagacgttgagcgggagatgagaaggttaggcttcaagaaggaaaag
gacttcgtggcccacataaccatcggccgcgtcaagttcgtcagggacaagctcgaactg
gcgatggcgttaaaagacctcgccaacgaggacttcggcgagttcgaggttaaagccata
gagctgaagaagagcacgctcacgccgaagggcccgatctacgagacggtggcaaggttt
gagctggcggagtga

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