Thermococcus barossii: A3L01_10150
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Entry
A3L01_10150 CDS
T05081
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tbs
Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbs03016
]
A3L01_10150
Enzymes [BR:
tbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A3L01_10150
Transfer RNA biogenesis [BR:
tbs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A3L01_10150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
TraC
HGD-D
DUF6304
DUF1045
STAS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
ASJ05706
UniProt:
A0A2Z2MIH7
LinkDB
All DBs
Position
complement(1877212..1877766)
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AA seq
184 aa
AA seq
DB search
MRAFIAIEVSDEVRDNLLKAQERIGNKSAKIKFVERENFHVTLKFLGEIDEITAEEVKKA
LEEIAKKHRKHRVRVKGIGVFPNPNYVRVIWAGIENDEGIKAIAKDVEREMRRLGFKKEK
DFVAHITIGRVKFVRDKLELAMALKDLANEDFGEFEVKAIELKKSTLTPKGPIYETVARF
ELAE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgttcatagccatagaggtcagcgacgaggttcgagataacctgctaaaggcc
caggagaggataggaaacaagtcggcaaagataaagttcgtcgagagggagaacttccac
gttaccctcaagttcctcggagagattgacgaaataacagcggaggaagtgaaaaaagcc
ctggaggagatagcgaagaagcacaggaagcaccgcgttcgcgttaagggcatcggtgtc
ttcccgaacccgaactacgtgagggtgatatgggccggaatagagaacgacgagggcata
aaggccatagcaaaagacgttgagcgggagatgagaaggttaggcttcaagaaggaaaag
gacttcgtggcccacataaccatcggccgcgtcaagttcgtcagggacaagctcgaactg
gcgatggcgttaaaagacctcgccaacgaggacttcggcgagttcgaggttaaagccata
gagctgaagaagagcacgctcacgccgaagggcccgatctacgagacggtggcaaggttt
gagctggcggagtga
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