Telmatherina bonti: 306754305
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Entry
306754305 CDS
T12083
Symbol
LOC306754305
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tbt
Telmatherina bonti
Pathway
tbt04137
Mitophagy - animal
tbt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
306754305 (LOC306754305)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
306754305 (LOC306754305)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbt03019
]
306754305 (LOC306754305)
03009 Ribosome biogenesis [BR:
tbt03009
]
306754305 (LOC306754305)
04131 Membrane trafficking [BR:
tbt04131
]
306754305 (LOC306754305)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbt04147
]
306754305 (LOC306754305)
Messenger RNA biogenesis [BR:
tbt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
306754305 (LOC306754305)
Ribosome biogenesis [BR:
tbt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
306754305 (LOC306754305)
Membrane trafficking [BR:
tbt04131
]
SNARE
SNARE associated proteins
Others
306754305 (LOC306754305)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
306754305 (LOC306754305)
Exosome [BR:
tbt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
306754305 (LOC306754305)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
Vps4_C
RNA_helicase
AAA_28
NPHP3_N
Parvo_NS1
Mg_chelatase
ATPase_2
DUF815
AAA_7
nSTAND3
ATPase
ABC_tran
AAA_18
nSTAND_NTPase5
AAA_17
TsaE
NACHT
NB-ARC
IstB_IS21
Viral_helicase1
ResIII
Sigma54_activat
AAA_24
PhoH
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
306754305
NCBI-ProteinID:
XP_079094391
LinkDB
All DBs
Position
3:18447430..18456729
Genome browser
AA seq
810 aa
AA seq
DB search
MPGSGGADPKGEDFSTAILKQKHRPNRLIVDEALSEDSSIVSLSQNKTEELQLFRGDTVV
LRGRKRRQTVGIVLTDETCGDERVRMNRVTRNNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGQPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFQEAENNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLERIAAETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDETIDADLLNSLAVTMDDFQWALGQSNPSALRETVAEVPQVNWED
IGGLEEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDKSSRTAILK
ANLRKSPVAKDVDLEFLSGITEGFSGADLTEICQRACKLAIREAIEAEIKAERQRQSRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSGSQEPGSGSGSGRSNLYRVEGDDDLYQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagatccaaagggagaagatttctccacggccatcctgaag
cagaaacacagaccaaacagactcatcgtggacgaagctctcagtgaagacagcagcatt
gtcagcctctcgcagaataagacagaggagttgcagctctttcgaggtgatacggtggta
ctgaggggacgaaagcggcgacaaacagtaggtatcgtcctgacggatgaaacctgtggg
gatgaacgggtccggatgaaccgagtcacgcgcaacaacctgcgcgttcggcttggtgat
gtcatcagcatccacgcatgccctgatatcaagtatgggaaaaagatccatgtcctccct
attgatgacaccattgagggcctgacagggaacctttttgaggttttcctcaagccatac
ttcctggaagcttaccgaccagttcacaaaggcgacatcttcctggtgagagggagcatg
cgggcagtggagttcaaggtggtggagacagaccccagtcctcactgcattgttgcccca
gacacagtcatctactgcgaggggcagccaatcaaaagagaggatgaagaagagagtctg
aacgacattggttatgatgacattggaggctgtcggaagcagctggcacagatcaaagag
atggtagagcttcctctcagacatccaggactcttcaaagctataggagtgaagcccccc
agaggcatcctcctgtatggccctgcaggtacagggaagaccctggtggctcgagctgtg
gccaatgaaactggtgctttcttctttcttatcaatggcccagaaatcatgagtaagcta
gcaggagagtcagaaagcaacctcagaaaagcgtttcaggaagcagagaacaacgctcca
gccatcatcttcatcgatgagctggatgctattgcccccaagagggaaaagactcacggt
gaagtggagaggcgtatagtgtcacagctcctgaccctgatggatggtttaaagcaaaga
gctcatgtggttgtcatggcagctacaaaccgaccgaacagcattgacccggctctgaga
cgctttggcaggtttgaccgtgagattgacattggaatcccagactcgactggtagactg
gagatcctgcagattcacactaaaaacatgaaactggctgatgacgttgacctggagagg
attgctgcagagacccacggccatgttggtgctgacctggctgctttgtgctcagaagct
gctctgcaggccatccgcaaaaagatgaccctgatagatctggaggatgaaaccatagat
gctgacctgctcaactcacttgctgtcactatggatgacttccaatgggcacttggtcag
agcaacccatcagctctgagagagacggttgcagaggtgcctcaagtgaactgggaggac
attggtgggctggaggaggtcaagagagaacttcaagaacttgttcagtacccagtcgag
tatcctgacaagttcctgaagtttgggatgacaccgtcgcgtggggttttattctatggt
cccccaggctgtggcaaaactctcctggcgaaggctatcgccaatgagtgtcaagcaaac
tttgtctccatcaaaggtcctgagatgctcactatgtggtttggagagtcagaggctaat
gtcagagacgtgtttgataaggccagacaggcagccccctgcatcttattttttgacgag
ttagactccattgccaaatcaagaggaggtggggcaggggatgcaggtggtgcagctgac
agagtcataaatcagattctcacagagatggacggcatgtccgacaaaaagaatgttttc
atcataggtgctacaaacagaccagacataatagatccagccatcctgcggccgggtcgt
ctggaccagctcatctacatcccactccctgacaaatcctcccgcacagcaattcttaaa
gctaacctgcgcaaatctcctgttgcaaaagatgtggatttggaatttctatctggcatc
acagaaggattttctggagctgacctgacagaaatatgtcagcgggcttgcaagctggct
atccgagaggccattgaggctgagatcaaggctgagcgtcagagacagagcagaccaggc
atccccatggatgaggacttcgatccagtcccagagatcaggaaggaccactttgaagag
gcgatgcggttcgcccgccgctctgtcagtgacaatgacatccgtaaatatgagatgttt
gctcaaactctacagcagagccgaggctttggaaacttcaggttcccctctgcgactggg
actcggtctggaagtcaggagcccgggtcgggctctgggtcaggcaggtcgaatctgtac
agagtggagggtgatgatgatctctatcagtga
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