Telmatherina bonti: 306754835 Help Entry 306754835         CDS       T12083                                  Symbol col2a1a Name (RefSeq) collagen, type II, alpha 1a   KO K19719   collagen type II alpha Organism tbt  Telmatherina bonti Pathway tbt04510   Focal adhesion tbt04512   ECM-receptor interaction tbt04518   Integrin signaling Brite KEGG Orthology (KO) [BR:tbt00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     306754835 (col2a1a)    04518 Integrin signaling     306754835 (col2a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     306754835 (col2a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tbt00536]     306754835 (col2a1a) Glycosaminoglycan binding proteins [BR:tbt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    306754835 (col2a1a) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  306754835 NCBI-ProteinID:  XP_079095051 LinkDB All DBs Position 4:<29376995..>29398220 Genome browser AA seq 1487 aa AA seqDB search MFSFVDSRTVLLLVASQVVLLSVVRCQEEDDQEAGGCIQDGQQYNDKDVWKPEPCRICVC DSGAVLCDEIICEEIKECANPIIPSGECCPICPADASSPIETIGAKGQKGEPGEIADVVG PRGPAGPMGPPGEQGPRGEAGAKGDTGNPGPHGRDGEPGTPGNPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGGPGEAGEPGPAGPMG PRGPPGPSGKPGSDGESGKPGKPGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG ETGAAGAKGEAGAAGENGSPGPMGPRGLPGERGRPGAAGAAGARGNDGLPGPAGPPGPVG PAGAPGFPGSPGAKGEAGPTGARGAEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGLPGFKGEAGPKGELGPAGPQG APGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGAAG PKGATGDPGRTGEPGLPGARGLTGRPGDAGPQGKVGPTGAAGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKPGEKGLVGRTGLRGLPGKDGETGAAGPPGPAGPAGERGEQGQPG PPGFQGLPGPTGSPGEAGKPGDQGVPGEGGAPGAVGPRGERGFPGERGGAGPQGLQGPRG LPGTPGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGPKGDRGDNGAKGPEGAPG KDGSRGLTGPIGPPGPAGPNGAKGETGPTGPSGAPGVRGAPGDRGEIGPPGPAGFAGPPG ADGQPGAKGELGEAGQKGEAGSPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPG AAGRVGPPGPNGNPGPAGPAGPAGKDGPKGARGDAGPPGRQGDAGLRGPAGAQGEKGEPG EDGPPGADGPSGPQGLAGTRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGAGDRGPPG PVGPPGLTGPAGEPGREGTPGADGPPGRDGATGVKGERGNTGPAGAPGAPGAPGAPGPVG PLGKQGDRGESGAQGPGGPPGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQG LPGPPGPAGDAGSAGPAGPFGAKGPAGPAGPAGKDGTNGQPGPIGPPGPRGRSGETGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADEASSSLRQHDVEVDSTLK SLNSQIESLRSPDGSQKNPTRSCRDLKLCHPEWKSGDYWVDPNLGSTADAIKVFCNMETG ETCVNPTIAKVPKKNWWTIKSKDRKHVWFGETMNGGFHFSYAQRGPDPNSASVQMNFLRL LSTEASQTLTYHCKNSIAYMDQATGNLKKSLLLQGSNEVEIRAEGNSRFTYSVLEDGCKR HTGQWGKTVFEYKTQKTSRLPIMDIAPMDIGGADQEFGVDVGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggactcaaggactgttctgctacttgtagcatcccaagttgtttta ctatccgtggtcagatgtcaggaagaggatgaccaagaggcaggtggctgcatccaggac ggccagcagtataatgataaggatgtgtggaagccagagccatgccgtatctgtgtgtgt gacagcggagcagttctgtgtgatgagataatctgcgaggagatcaaagagtgtgccaac cctatcatcccatctggagagtgctgtcccatctgccccgctgatgccagtagccccatt gagacaattggtgccaagggccagaaaggggaaccaggagagattgcagatgttgtagga ccaagaggaccagctggccctatgggccccccaggtgagcagggaccacgtggagaagct ggcgcaaagggtgatacgggaaatcctggacctcatggaagagatggtgaacctggcacc cctggaaaccccggaccacctggcccacctggaccaccagggctcggagggaactttgct gctcagatggctggaggttttgatgagaaagcaggaggtgctcagatgggtgtgatgcag gggccaatgggtcccatgggtccccgtggtcctcctggaccttctggagcccccgggcca caaggtttccaaggtggacctggtgaggctggagagccaggtccagctggaccaatggga ccccgtggaccacctggaccttctggaaaaccaggaagtgatggtgaatctggaaaacct ggcaaacctggtgagcgtggacctgcagggcctcagggagctcgtggattccctggaact cctggacttcctggaattaaaggacacagaggtcatcctggtctggatggagctaaagga gagactggtgctgcaggggcaaagggcgaagctggtgctgctggagagaatggttcccct gggcccatgggtccacgtggtctgcctggtgagagaggacgtcctggagctgctggagct gctggtgcccgtggaaatgatggcttgcccggtcctgctggtccacctggtccagttggt cctgctggagctccaggtttcccaggatctccaggagccaagggagaagctggtccaact ggtgccagaggagctgaaggacaacaaggaccccgtggagaagctggcactccaggatct cctggacctgctggagcatcgggtaaccctggtactgatggtatccctggagccaaagga tctgctggagcccctggtattgctggtgctcctggattccctggccctcgtggaccacct ggaccacagggagctactggacctctcgggcccaaaggacagtctggagaccctggtctt cctggattcaaaggtgaagctggaccaaagggagagcttggtcctgctggtcctcaaggt gcccctggccctgctggagaggaaggaaaaaggggcgcaagaggagaacctggagctgct ggaccacttggaccacctggagagagaggagctcctggtaatcgtggtttccctggtcaa gatggtctggctggtgctaagggtgctcccggtgaccgcggtgtccctggtgctgctggg cctaaaggggctactggagaccctggccgtacaggagagcctggactccctggagccaga ggtcttactggtcgtcctggagatgctggtcctcaaggcaaagttggacccactggtgcc gctggagaggacggtcgccccggcccacctggtccccagggagcccgtggccaacctgga gtgatgggattccctggaccgaagggagccaatggtgaacctggaaaacctggagagaag ggacttgttggccgcactggtctgagaggtctacctggaaaagatggtgagactggtgct gctggacctcctggccctgctggacctgctggagaaagaggagagcaaggacagcctgga cctcctggcttccagggtctgcctggaccaactggttccccaggagaggctggaaaacca ggagaccagggtgttcctggagagggtggggctcccggtgctgttggacccagaggtgag cgtggtttccctggtgagagaggtggtgctggaccccagggtcttcagggcccccgtgga cttcctggaacacctggaagtgatggacccaagggagcaattggaccagctggtgctgct ggaccccagggacccccaggcctgcagggtatgcccggagagagaggagctggtggtatc ccgggacccaagggagacagaggggataatggagcaaagggacctgagggcgcacctgga aaggatggttctagaggtttgactggtcctattggtccacctggcccagctggacctaat ggtgccaagggtgagactggaccgactggtccctctggtgctcctggtgtccgtggtgct cctggtgaccgtggtgagattggtcctcctgggcctgctggcttcgctggacctcctggt gcagatggtcagcctggtgccaagggagagcttggtgaggccggacagaagggagaagct ggttctcctggacctcagggaccatctggagctcctggacctgtgggtcctactggtgta tctggacctaaaggagcacgtggtgctcagggagctcctggtgccacagggttccctggt gctgcaggtagagttggacctcctggtcccaatggtaaccctggtcctgctggtcctgct ggccctgctggtaaagatggaccaaagggtgctcgtggtgatgctggacccccaggaaga caaggcgatgctgggctgcgtggacctgctggcgctcagggagagaagggagaacctgga gaggatggacctcctggtgctgatgggccatcaggtcctcagggtctggctggaactcgt ggtattgttggtttgcctggtcagcgtggtgagagaggtttcccgggtctccctggacct tctggagaacctggcaaacagggagctcctggtggtgctggtgaccgtggacctcctgga cctgttggtccacctggacttactggacctgctggagagcctggtagagagggtacccct ggagcagatggaccccctggtagggatggagcgactggagttaagggagagcgaggcaac accggacctgcaggagcgcctggagctcccggggcccctggtgcccctggacctgtcgga cctctcggcaagcagggagacagaggagagtctggagctcaaggacctggaggaccccca ggaccagctggtgctcgaggaatggccggaccccaaggaccacgtggagacaagggagag gctggcgagactggggagaggggacagaagggtcaccgtggcttcaccggtttgcagggt cttcctggacctcctggtcccgctggagacgctggatctgccgggcctgcaggaccgttt ggcgctaagggaccagctggaccagccggacctgctggcaaagatggaactaatggacaa cctggccccattgggccacctggacctcgtgggcgctctggggaaactggtccagctggt cctcctggcaaccctggaccccctggtcctcctggtccaccaggcccgggcatcgacatg tctgctttcgctggtctggggcagactgaaaagtctcccgatcctctcaggtacatgagg gccgacgaggcctcgagctccttgaggcagcacgacgttgaggttgattccactctcaag tccctcaacagccagattgagagcctgcgcagccctgacggctcccagaagaaccccact cgtagctgcagggaccttaagctgtgccacccagagtggaagagcggtgattactgggtt gatcccaaccttggcagcactgcagatgccatcaaggtcttctgtaacatggagacagga gagacctgcgtcaatccaaccattgccaaagtaccaaagaagaactggtggaccatcaag agcaaggaccgcaaacatgtctggtttggagagaccatgaatggaggattccacttcagc tatgctcagcgtggccccgatcccaacagcgcttctgtccagatgaacttcttgagactt ctgtctactgaagcatcccagaccctcacttatcactgcaaaaacagcattgcctacatg gatcaggccactggaaacctgaagaagtctttgctgctgcaaggctccaatgaagtggag atccgtgcagagggcaacagtcgcttcacttacagcgtgttggaggatggctgcaagagg catacaggacagtggggcaagactgtctttgagtacaaaacacagaaaacctcccgtctg ccaatcatggacattgctcctatggacatcggaggagcggaccaggagtttggagtagat gtaggcccagtctgcttcttgtaa

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