Telmatherina bonti: 306755057
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Entry
306755057 CDS
T12083
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
tbt Telmatherina bonti
Pathway
tbt04110
Cell cycle
tbt04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
306755057 (smc1a)
04114 Oocyte meiosis
306755057 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbt03036
]
306755057 (smc1a)
Chromosome and associated proteins [BR:
tbt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
306755057 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
306755057 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF8567
Motif
Other DBs
NCBI-GeneID:
306755057
NCBI-ProteinID:
XP_079095422
LinkDB
All DBs
Position
4:22291961..22302236
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDTGEERSFTRVIIGASSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIEKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTE
ESSSQRTSSSVLAKEALIEIDYSSLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggggtatttgaaacttatagagatcgaaaacttcaagtcatacaaaggaagacagatc
attggaccttttcacaagtttactgcaatcatcggacctaatggatctggaaagtctaac
cttatggatgccatcagctttgtgttggcggaaaagaccagcaaccttcgtgtaaaaact
ctgaaggacttaatccatggagcacctgtagggaagccagctgctaacagagcttttgtc
agtatggtgtaccaggaagacactggtgaagagcgctccttcacaagggttattattggt
gcctcctctgagtaccgcattaacaataaggtggtgggcctgccagaatatagcgaagag
ctggaaaaacttggcattctgattaaggccaggaacttcctagtctttcagggagctgtg
gagtctattgccatgaagaatcccaaagaacgtactgcactctttgaagagatctctcgt
tctggagaactggcccaggagtatgaccggaggaagaaagagatggtgaaagcagaggaa
gacacacagttcaactatcatcggaagaagaacattgctgcagaacgtaaagaagccaag
caagagaaagaggaggctgagcgttaccagcgtcttaaggatgaagtagccagggccagc
gtgcagctgcagcttttcaaactgtaccacaatgagactgagattgaaaagctgaataaa
gagcttggccagcggaacaaagagattgagaaagaccgtaaaaagatggaccacgtagag
gaagagctgaaggacaagaagaaggagctgggcaggctaatgagggagcagcagaccatt
gagaaagaaataaaagagaaggactctgagttgaaccaaaagaggcctcagtacatcaag
gccaaagagaacacatcacacaaaatcaagaaacttgaggctgcccgaaaatctctgcag
aatgctcagaagatgtacaagaagcgtaaagcagacatggatgagttggataaagagatg
agggcggttgaactggcaaagcaggagtttgaggaaagaatggaagaagaagcacagagc
cagggccaggacctgactctggaagaaaatcaggtgaagcagtaccatcgtctgaaggag
gaggccagtaaacgtgctgccactctggcacaggagctggaaaagttcaaccgggaccag
aaggcagaccaagaccgccttgacttggaggaaaggaagaaagtggagaccgaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaactggaggac
tacattgccaccagcaggcagtcgcttgatgagcagaagcgcatggaggaggagctgaca
gaggaggtagagatggcaaagaggagaattgatgagatcaacatggagcttaaccaggta
atggagcagctgggtgatgccagaatcgacaggcaagagaacagtcgacagcagcgcaag
gcagaaatcatggagagcatcaaaaggctctaccccggctccgtgtacggtcgtctgatc
gacctgtgtcagcccactcagaagaagtatcagatcgctgtgaccaaagtgttgggcaag
aacatggatgccatcattgttgactcagagaagactggcagagactgcattcaatacatc
aaggagcagcgaggggagcctgagactttccttcctcttgactaccttgaggttaaacca
acagatgagaagctgagagaactgcgaggagccaagctggtgattgacgtgattcgctat
gagccgcctcacatcaagaaagccctccagtatgcgtgtggcaacgctcttgtttgtgag
aatgttgaggacgcacgaaggattgcttttggaggtccttacaggcacaagacggtagcc
ctggatggaactctgttccaaaaatctggagtcatctctggaggagccagtgacctgaaa
gcaaaggccagacgctgggatgagaaggcagtggacaagctgaaggagaaaaaggaaaaa
ctgactgaagagctcaaagagcaaatgaaggcaaagagaaaggaggcagagctgcggcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtattcacagagcgacctggaa
cagacaaaaacccgacacctctccctcaacatgcaggagaagtccaaactagagagtgaa
ctcgcaaactttggccctcgcattaatgatatcaagaggatcatccagtcccgtgagcga
gaaatcactgacctccgggaccgcatgaatctggtggaagatgaggtgtttgttgagttc
tgtaaggagattggcgtgaggaacatcagagaatttgaggaagagaaagtgaagaggcag
aatgaaatcgcaaagaagcgtcttgaatttgagacccagaagacccgcctgggtatccag
gtggactatgagaagaaccagctgaaggaggatcaagagaaggtcatgatgtgggagcag
actgttaagaaggatgaagctgagatagagcgacttaaaaaggaggagcacagacacatg
aaaatcattgatgaaacaatggcccagctacaagacctgaagaaccaacacctcactaag
aaatctgaagtcaatgataaaaaccatgaaatggaggagatccggaaaaaactgggaggc
gccaacaaagaattgactcagctccagaaggaggtgactgccattgagaccaaactggag
cagaagcgcagtgaccggcacaacctgctgcaggcctgcaaaatgcaggacatcaggttg
ccgcttcgctctggaacaatggatgatatcagtcagggagaggggagctcgcagacagag
gagtccagcagccagaggacctccagcagcgttctggctaaagaagccctcatagagatt
gactacagcagtctgtctgaggacctcaaggatgcactgtcagaggaagagattaaagcg
gagacgaacacactgcagcagcgtctgaatgaacagcagagcatcctgcagaggatcagt
gcgcccaacatgaaggccatggaaaagctcgagagtgtcagggacaaattccaggagacc
agcgacgagtttgaggctgctcgcaaaagagccaaaaaggccaagcaagcctttgagcag
atcaaaaaggaaaggtttgatcgttttaatacctgttttgagtctgtggccaccaacatc
gatgaaatctacaaggcgctctcacgcaacagcagtgctcaggcttttctgggcccagaa
aacccagaggaaccatatctggatggtatcaactataactgtgtggctccagggaagagg
ttccgacctatggataacctgtcgggaggagagaagactgttgctgctctagctctgctg
tttgctattcacagctacaaaccggcccccttcttcgtcctggatgagatcgacgcagct
ctggacaacactaatataggaaaggtggccaattacataaaagaccagtcagtgcagaac
ttccaggccattgtcatttctctgaaggaggaattctacaccaaggcagactcacttata
ggagtttatccagagcaaggagattgtgttatcagcaaagtgctcacctttgacctctca
cagtatccagatgccaacccaaacccaaatgaataa
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